Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g3999 ATGGTTCTTCAATTCCACGAACACATAATCACAGAGCTTCTCGAAGACACCAATGGCGGTCTCGTCATTCTCTCTTCAGGTCTCTCTCTATCGAAACTCATTTCATCTCTTCTCCTTCTCCACTCCACTTCTCAGGGAACACTTCTCATTCTATCTCCTTCTTCCGCTACTCTCAAATCCAAAATCAATTTCCATCTCAAAACCCTAAACCCCCAATTCTACCAAGTCCCCGTCGAAATCACCGCCGACCTCCCCGTTAATCACCGTCACTCCCTCTACTCATCCGGCTCCGTCTGTTTCATTACCCCTAGAATCCTCATCGTTGATCTTCTCACTAATAAACTACCTGCCTCAATTATCTCCGGACTCATCATCCTCAACGCTCATTCCGTTTCGGAGACTTCCACGAAGCGTTTATTGCCACAAGCGATGGTTTCGGGTTTTGCGAAAGCGGAGAGAACTATGAAGTGTTTGCATATTCAGGCGAGCTATAAAGATATTTGGATCTATGCAAAGAAACGTGTTTATCATCTTGTGAGGTCAGATGGTATGAAATTGGACGAGTCTAGTAAAGGTGTCAAAAACAAAAAGAAAAAAGTCAAGGGGGATAACAAAGACACTGAAGAAGCTGATGTCACTTCCTCAACCAGTTCAAATCATGGCATAGTTTTGGAGGAAGTCTTGGAAGAAGCACCAAAGTGGAAGGTCTTACGTGATATTCTTGAAGAGGTAGAGGAGGAAAGACAAAAGCAAGGCATGTTGAGGGAAGAGGTTTTGGCTGAAGGTGAAGACACCAGCAATGGCATTGTATTAGTGGCATGTAAAGATGAAAGGTCGTGCTTGCAGCTCGAAGAATGCATCACCAACAGTTCGAAAAAGGTCATGCGAGACGAATGGAAAAAGTACTTACTAAGCAAAGTACAGCTGCGAGATGTAGTGCATAAGAATAAGAAAAAGAAGTCAAAGGAGCCTAAGGGTTTTGGGATTCTTAATGGAGTCACTCCCATATCCCCTGCACAGAATACAGAAACCAGTGGCGTTAATAAGCAGGAGCATGATGCACTTATGGCGGCAGCTTCAAAACTGCGAAATCTTGCTGAAAATAATCATGTTGTCGAAGATACACCTCAGTCTAATATGGGGGGACATGTTCGGGGAAAAGGCAAGAGAAAGTTGGCAAATAGAAATGACCCAATCATTATTGATGGCTCTGGTGTTCAGAGTAATAATGAGGAAGTGACAAGTGGTAAAATTGGGATGCCTGATACAAAAAATGAAGCCCATATGGATGAAACTAGTCCTGTCAGTGCTGGTAGATTTTGTGAAACCAAACATGGGGGGATATCTGTAGATGACACGGTTCTTCGGAGGCATACCTGTCCTAATGCCATGGCAAAAGACGGGAAGCCACTACCACCAGTACATTTTTATGCCCTAGAAAGTGATCAGCCTATACTGGACATATTAAAGCCCTCTATAATAGTCGTTTACCATCCAGACATGACCTTTGTAAGAGAAATTGAAGTCTACAAAGCTGAGAATCCCTCAAAAAAGTTAAAGGTATATTTTATTTTCTATGAAGATTCAACTGAGGTGCAGAAGTTTGAAGCAAGTATACGTAGAGAGAATGGAGCATTTGAATCTTTGATCAGGCAAAAATCTATGATGATGATTCCAGTTGATCAGAGTGGGCATGGTTTAGGATTGAATTTTACCCCAGATTCAGATTTAAATACTGCCCAAAACTCAATAACTAGAAAAGCAGGGGGGAGAAAGGAGGTTGGTAAAGAAATGCAGGTCATTGTGGACATGCGAGAATTCATGAGCAGCCTTCCAAATATTCTTCATCAAAAGGGAATGCGCATAATTCCGGTAACCCTTGAAGTTGGTGACTATATCTTATCACCTTTAATTTGCGTGGAAAGAAAAAGTATTCAAGATCTCTTCCAGAGTTTCACATCAGGTCGTCTATACAATCAGGTGGACACAATGCTGCGATATTATAGGATACCTGTGCTCTTGATTGAGTTTTCACAGGATAAGAGCTTCTCATTTCAGTCTGCCAGTGATATTGGTGATGATGTGACACCCAATAGCATTATATCAAAGTTGTCATTGCTTGCTCTACATTTTCCCCGGCTACGAATAATCTGGTCTCGAAGTTTGCATGCTACTTCTGAAATATTTGCTTCACTGAAGGCAAATCAAGATGAACCAGATGAAACAAAAGCAATGAGAGTGGGTGTCCCCTCAGAAGAAGGAATTGTGGAAAATGATGTGAGGGCTGAAAATTACAACACATCGGCTGTGGAGTTTCTAAGACGACTTCCAGGTGTTTCAGATTCTAATTATAGGGCCATAATGGACGGGTGTAAAAGTTTGGCAGAACTTGCACTTATTCCAGTAGAAAAGCTAGCTGAAATAATGGGTGGTCATAAGGCTGCTCAGACCCTTAGAGACTTTCTAGATGCTAAATATCCCACTTTGTTGTGA 2493 0.4192 MVLQFHEHIITELLEDTNGGLVILSSGLSLSKLISSLLLLHSTSQGTLLILSPSSATLKSKINFHLKTLNPQFYQVPVEITADLPVNHRHSLYSSGSVCFITPRILIVDLLTNKLPASIISGLIILNAHSVSETSTKRLLPQAMVSGFAKAERTMKCLHIQASYKDIWIYAKKRVYHLVRSDGMKLDESSKGVKNKKKKVKGDNKDTEEADVTSSTSSNHGIVLEEVLEEAPKWKVLRDILEEVEEERQKQGMLREEVLAEGEDTSNGIVLVACKDERSCLQLEECITNSSKKVMRDEWKKYLLSKVQLRDVVHKNKKKKSKEPKGFGILNGVTPISPAQNTETSGVNKQEHDALMAAASKLRNLAENNHVVEDTPQSNMGGHVRGKGKRKLANRNDPIIIDGSGVQSNNEEVTSGKIGMPDTKNEAHMDETSPVSAGRFCETKHGGISVDDTVLRRHTCPNAMAKDGKPLPPVHFYALESDQPILDILKPSIIVVYHPDMTFVREIEVYKAENPSKKLKVYFIFYEDSTEVQKFEASIRRENGAFESLIRQKSMMMIPVDQSGHGLGLNFTPDSDLNTAQNSITRKAGGRKEVGKEMQVIVDMREFMSSLPNILHQKGMRIIPVTLEVGDYILSPLICVERKSIQDLFQSFTSGRLYNQVDTMLRYYRIPVLLIEFSQDKSFSFQSASDIGDDVTPNSIISKLSLLALHFPRLRIIWSRSLHATSEIFASLKANQDEPDETKAMRVGVPSEEGIVENDVRAENYNTSAVEFLRRLPGVSDSNYRAIMDGCKSLAELALIPVEKLAEIMGGHKAAQTLRDFLDAKYPTLL* 831
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g3999 830 Gene3D - 599 745 - -
Psa2g3999 830 SUPERFAMILY RuvA domain 2-like 761 825 IPR010994 -
Psa2g3999 830 SUPERFAMILY Restriction endonuclease-like 597 734 IPR011335 -
Psa2g3999 830 Pfam ERCC4 domain 602 731 IPR006166 GO:0003677|GO:0004518
Psa2g3999 830 SMART ERCC4_2 599 679 IPR006166 GO:0003677|GO:0004518
Psa2g3999 830 MobiDBLite consensus disorder prediction 190 210 - -
Psa2g3999 830 PANTHER DNA REPAIR ENDONUCLEASE XPF 164 826 - -
Psa2g3999 830 PANTHER DNA REPAIR ENDONUCLEASE XPF 2 161 - -
Psa2g3999 830 Coils Coil 237 261 - -
Psa2g3999 830 MobiDBLite consensus disorder prediction 190 217 - -
Psa2g3999 830 Gene3D - 757 828 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g3999 Psa-Chr2 415011283 415016677 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g3999 K10848 - gmx:100812359 1082.78