Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g3950 ATGTCTTGCTTAGAGTTAGAACTCTCTAAAGAGAACAAGTTCAAAGAAGAATCAGAATCCCAAGAGTTGACTCTTGATGGAAGTGTTGATTTCTATAACCGTCCGGCAATCAGAGCCAAGTCTGGAAGATGGAGTGCTGCAACCATCATACTCTTGAACCAATGTCTGGCAACTCTGGCATTCTTTGGGATCGGAGTGAACCTGGTGGTTTTCCTGACAAGGGTGGTAGGACAAAGTAATGCAGAAGCCGCAAACAATGTGAGCAAATGGACTGGAACGGTTTACATCTTCTCTCTTGTGGGAGCTTTCCTTAGTGACTCTTATTGGGGAAGATATAAAACATGTGCCGTCTTTCAAGTCATTTTTGTAATAGGTCTAATGTCCTTATCACTGTCATCATACCTCTTCTTGATTAAACCAAGAGGCTGTGGAAATGAATCGATTCCGTGTGGAAAACATTCAAGTTTGGAGATGGGGATGTTCAACCTCTCAATCTATCTCATTGCCTTAGGGAATGGAGGTTATCAACCAAATATTGCCACATTCGGTGCTGATCAGTTTGACGAGGAGCATTCGAGAGAGGGTCACAATAAAGTGGCCTTCTTCAGCTACTTCTACCTAGCTTTGAACTTTGGGCAACTCTTTTCAAACACCATTCTGGTGTATTTTGAAGATGAAGGAATGTGGGCTCTTGGTTTCTGGCTGTCTGCAGGCTCTGCCTTTGCTGCACTGATACTGTTTCTAGTAGGCACCCCAAGGTATCGACATTTCAAGCCTAGTGGCAACCCTCTCGCCAGGTTTTGCCAAGTTCTTGTGGCCGCGTCAAGGAAAGTGAAAGTTCAAATGCCGTCAAACGGAGAGGATTTGTATAACATGGATACAAAGGAGTCTTCCGCCAATATGAACAGAAAAATCCTCCATACTCACGGGTTCAAGTTCTTGGATAGGGCAGCGTTTATATCTTCAAGAGATTTTGATAACCAGAAATGCGCAAGTTACAGTCCATGGCGTCTCTGTCCTGTAAGTCAAGTTGAAGAAGTGAAGTGCATACTGAGACTTCTTCCGATTTGGCTCTGCACCATAATATACTCGGTGGTTTTCACACAAATGGCATCTCTTTTTGTGGAGCAAGGTGCTGCCATGAAAACTACTGTTTCCAATTTCAAAGTGCCACCAGCTAGCATGTCTAGCTTTGATATTATCAGTGTGGCTGTCTTCATTTTCTTTTACCGTCGAATTCTTGATCCATTTGTGGGAAAGCTTAAAAAATCAGATTCTAAGGGTCTTACCGAGCTTCAGAGAATGGGAGTTGGACTTGTTATAGCTGTGATAGCAATGCTTTCAGCTGGAATAGTTGAATGCTATAGGCTTAAGCATGCAAACCAAACATGCACCCACTGCAAAGAGTCGAGTACTTTGAGCATCTTCTGGCAAATCCCTCAGTACACATTTATAGGAGCTTCTGAGGTGTTTATGTATGTAGGGCAGTTAGAGTTCTTCAATGCTCAGACACCAGATGGCTTAAAGAGCTTCGGAAGTGCACTTTGCATGACATCCATTTCCCTTGGCAACTATGTAAGTAGCTTACTTGTCAGTATAGTTATGAAGATATCTACCGAGGATCACATGCCAGGGTGGATCCCTGGAAACCTCAATAAAGGCCACCTAGATAGGTTTTACTTCCTCTTAGCAGCCTTGACATCGATGGACTTGATCGCCTATATTGCTTGTGCAAAGTGGTACAAGAGTATACAGCTGGGCGAGAAACCTAAAGAAAATGATGACCCAAGTAGCTTCACAGTCTAA 1806 0.4324 MSCLELELSKENKFKEESESQELTLDGSVDFYNRPAIRAKSGRWSAATIILLNQCLATLAFFGIGVNLVVFLTRVVGQSNAEAANNVSKWTGTVYIFSLVGAFLSDSYWGRYKTCAVFQVIFVIGLMSLSLSSYLFLIKPRGCGNESIPCGKHSSLEMGMFNLSIYLIALGNGGYQPNIATFGADQFDEEHSREGHNKVAFFSYFYLALNFGQLFSNTILVYFEDEGMWALGFWLSAGSAFAALILFLVGTPRYRHFKPSGNPLARFCQVLVAASRKVKVQMPSNGEDLYNMDTKESSANMNRKILHTHGFKFLDRAAFISSRDFDNQKCASYSPWRLCPVSQVEEVKCILRLLPIWLCTIIYSVVFTQMASLFVEQGAAMKTTVSNFKVPPASMSSFDIISVAVFIFFYRRILDPFVGKLKKSDSKGLTELQRMGVGLVIAVIAMLSAGIVECYRLKHANQTCTHCKESSTLSIFWQIPQYTFIGASEVFMYVGQLEFFNAQTPDGLKSFGSALCMTSISLGNYVSSLLVSIVMKISTEDHMPGWIPGNLNKGHLDRFYFLLAALTSMDLIAYIACAKWYKSIQLGEKPKENDDPSSFTV* 602
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g3950 601 Gene3D MFS general substrate transporter like domains 15 587 IPR036259 -
Psa2g3950 601 CDD MFS_NPF7 44 580 - -
Psa2g3950 601 PANTHER PEPTIDE TRANSPORTER 18 590 - -
Psa2g3950 601 SUPERFAMILY MFS general substrate transporter 35 591 IPR036259 -
Psa2g3950 601 Pfam POT family 112 540 IPR000109 GO:0016020|GO:0022857|GO:0055085
Psa2g3950 601 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 18 590 IPR000109 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g3950 Psa-Chr2 412777061 412781712 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g3950 1 594 Organic Solute Cotransporters AT1G32450 74.707 0.0 930
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g3950 K14638 - gmx:100776457 1040.41
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa2g3950 2 412777061 412781712 Psa4g1835 4 130750321 130756758 PCT