Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g3947 ATGAGTGGCATAGCATTGATACCCGCACCTTGCAATCTCGTAATTGCATCTTCTTCCTCATCATCCAAATTTCAAAAAACAATCAGAACCAAAACCAGAGTCTCACTCAACAACGCCATATCCATCTCTTCAGACCCCTTTGTTCTCGAACTCGCCGAAGCCTTAGAAGACTCCGTTCCAACACCACAACCTCTCCAGAATCTTCGAGAAGCTTCCTCCGAATCTCTCCTCTCATCTTCATGGCCTTCCCGCAGAGACGAACCCTTTCGTTTCACCGACATCTCTTTCCTCCGCTCTTCCCAAATCCTCCCCGCCCCAATTCCAACACCAACCCCAACCATAACGCCGTTCTCCACCTCCCAATTCCCCTGTCACATCAGCATCGTCGATGGACACTTCATAAGCTCATTGTCTGAAACCTCGGAGTTTCCCGATGGGGTTTACGTTGGTAGTTTGTCGAATTTGAATTCTACTGTTGCTGAACGGGTGTTGGAATTGGTTTGTGGATTGGAAGGTGGTGATTTGTTTTGGTCAATCAACGGTATGGGTGCTCCTGATTTGACGGTGGTTTATGTGCCGGAGGGCTGTCATCTTCAAAGTCCGGTTCATTTGGGTTATTTTTCGTTGCAGGGTAGTAAGGAAGGTTCGAATGCTTTGTATCTTTCAAATCCGAGGGTTTTGGTGGTGGTGGAGAAAGGTGGAGAAGTTGATATAATTGAAGAGTTTTCCAATGATGAAGAGAATGAGAATGGGTGTTATTGGACTAATGCTGCTTTGGAAGTGGTGATTGGGGAAGGGGGTAAAGTTAGGCATTCTTACATTCAGACTCAGTCACCTCTTGCTGCACACATCAAATGGACCTCGGTTCGCCAGGAGGCATCCAGTACATACGAGCTTACAGAGGTAAGCACAGGAGGCAAACTAGGAAGGCATAATCTTCATATCAAACAACTAGGTCCGGAAACGGTGACAGAGTTATCAACTTTGCACTTGTCTGCTGGTAATCAAACACAGGATCTTCACAGTAGTCTTGTATTCGATCATCCAAGGGGCTATTCTCGTCAGCTTCATAAGTGCATTGTGACTCATTCACAGGGACAAGCAGTTTTTGACGGAAACGTTAAGGTTAACAGATATGCCCAGCAGACAGATGCAGGACAGTTAACAAGAAGCCTTCTTCTTGAACCCCGTGCAACTGTAAATGTTAAACCGAATCTCCAAATCATCGCTGATGACGTCAAGTGTTCCCATGGAGCAGCAATAAGTGACCTCGAACAAAGCCAGCTCTTGTATTTCCAAGCACGCGGCATTGATTCAGAAACAGCTAGAAGGGTTCTAATATTTGCATTTGGAGGTGAAGTGATAGATAAGTTTCCTTATTCTTCCATTAGAGATAAAGTACGAAGTCAGATGAAAAGTTTATTGGATCCATCTTCTAAATGA 1443 0.4505 MSGIALIPAPCNLVIASSSSSSKFQKTIRTKTRVSLNNAISISSDPFVLELAEALEDSVPTPQPLQNLREASSESLLSSSWPSRRDEPFRFTDISFLRSSQILPAPIPTPTPTITPFSTSQFPCHISIVDGHFISSLSETSEFPDGVYVGSLSNLNSTVAERVLELVCGLEGGDLFWSINGMGAPDLTVVYVPEGCHLQSPVHLGYFSLQGSKEGSNALYLSNPRVLVVVEKGGEVDIIEEFSNDEENENGCYWTNAALEVVIGEGGKVRHSYIQTQSPLAAHIKWTSVRQEASSTYELTEVSTGGKLGRHNLHIKQLGPETVTELSTLHLSAGNQTQDLHSSLVFDHPRGYSRQLHKCIVTHSQGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEQSQLLYFQARGIDSETARRVLIFAFGGEVIDKFPYSSIRDKVRSQMKSLLDPSSK* 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g3947 480 TIGRFAM sufD: FeS assembly protein SufD 186 466 IPR011542 GO:0016226
Psa2g3947 480 SUPERFAMILY Stabilizer of iron transporter SufD 58 475 IPR037284 -
Psa2g3947 480 Pfam SufBD protein N-terminal region 126 203 IPR045595 -
Psa2g3947 480 PANTHER PROTEIN ABCI7, CHLOROPLASTIC 25 478 IPR011542 GO:0016226
Psa2g3947 480 Pfam SUF system FeS cluster assembly, SufBD 222 450 IPR000825 GO:0016226
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g3947 K09015 - gmx:100791104 610.527