Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g3945 ATGTTCCCAATAGTGCATGTTGGAAGTGGCAAAGAAATGACAATGGGTGAGAGTGGGAAGTGGAACAAAAGTGTGCATGTTTTTGGTGAGAGGCTAAAGAGATATCCTAGTTTAGGTTGGAAGGTTATATGGAATGTTGGATATGAAGATCCAAGAAGGGTGATCCATGCATTTAAAGTTGGTTTGTCTCTCACTTTAGCTTCTTTGTTGTATTTGTTGGAGCCAATTTATAATGAGATGGGACAGAGTGCAATTTGGGCTGTCATGACTGTGGTGGTTGTGCTTGAGTTCACTGCCGGAGCAACTTTATGCAAAGGTCTTAACAGAGGATTGGGGACACTATTAGCTGGATTATTGGCATTCATGGTTGGATATATTGCAAATGCATCACCTGATAGAATCTCTCAAGCTGTTATCATTGGTGCTGCAATTTTTTTTATAGGAGCTTTAGCTACTTATATGAGATTCATTCCTTATATAAAGAAGAACTATGACTATGGTCTAGTTATATTTCTCATGACTTTTAATTTGATTGCTTTGTCAAGCTATCGTGTGGAAAATGTCTTGAAGATAGCACACGATCGCTTATTCACTATTGCCGTAGGTTGTGCCATTTGCCTTATAATGAGCCTGCTGATGTTTCCAAATTGGTCAGGAGAAGATCTCCATAATTCTACTGCTTTCAAGCTTGAAGGACTTGCCAAATCTATCGAGGCTTGTGTCAATGTATACTTTTATGGCGAAACCGATAGCCCTGGAGATAGCAACTCGTCCGAGGATCCGATATACAAAGGTTATAAGAATGTTTTGGATTCAAAATCCATTGATGAAATGCTGGCATTGCATGCAAGTTGGGAGCCAAGGCATTCTAGGTACTGTCACAAGTTTCCATGTCAACAGTATGTAAAAGTCGGAGCTGTTCTTCGCCAATTCAGTTACACCGTGGTCGCTCTACATGGCTGTTTGAGATCAGAAATTCAGACACCAAGATCAGTTAGAGCTATGTTTAAGGATCCATGCATAAGGGTTGCAGCAGAAGTATCAAAAGTATTGATAGAACTTTCCAACAGCATAAGAAACCGTCGACATTGCTCGCCTGAAATACTGTCTGATCATCTTCATGAAGCTCTGCAGGATCTCAACAATGCGATAAAGTCTCAACCTCGTCTCTTCTTAGGCTCAAAGCACAAACACAACCATGCAAACAACATGCTCAAAATAGCTGCTGCACAAGTCGGTCACCAAGTAAAAGCCTCTGGATTCTCTTTATCGAGTGTTAAAACCGACTCTTCCGCGTTGCTTGAATGGAAAACAAAAAGAGATTCGTTAATGCAATCGAAGGAAAACGAAAGAAAATCTTTGAGACCTCAATTGAGTAAAATTGCTATTACTAGTCTTGAATTCTCCGAGGCGCTTCCTTTTGCTGCTTTTGCATCTTTGCTTGTGGAAACAGTTGCGAAATTGGATTTCGTTATCGAGGAAATTGAAGAACTTGGAAGATTATCTTGCTTTGAAGAGTTTAGAGCTGGTGATGAGATTGTTGTGACTTGTGAGGAGCCTCTAGTTGATGTTTCGCGGAACAACTTACCTTCACATGGAATTGAATAG 1608 0.403 MFPIVHVGSGKEMTMGESGKWNKSVHVFGERLKRYPSLGWKVIWNVGYEDPRRVIHAFKVGLSLTLASLLYLLEPIYNEMGQSAIWAVMTVVVVLEFTAGATLCKGLNRGLGTLLAGLLAFMVGYIANASPDRISQAVIIGAAIFFIGALATYMRFIPYIKKNYDYGLVIFLMTFNLIALSSYRVENVLKIAHDRLFTIAVGCAICLIMSLLMFPNWSGEDLHNSTAFKLEGLAKSIEACVNVYFYGETDSPGDSNSSEDPIYKGYKNVLDSKSIDEMLALHASWEPRHSRYCHKFPCQQYVKVGAVLRQFSYTVVALHGCLRSEIQTPRSVRAMFKDPCIRVAAEVSKVLIELSNSIRNRRHCSPEILSDHLHEALQDLNNAIKSQPRLFLGSKHKHNHANNMLKIAAAQVGHQVKASGFSLSSVKTDSSALLEWKTKRDSLMQSKENERKSLRPQLSKIAITSLEFSEALPFAAFASLLVETVAKLDFVIEEIEELGRLSCFEEFRAGDEIVVTCEEPLVDVSRNNLPSHGIE* 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g3945 535 PANTHER ALUMINUM ACTIVATED MALATE TRANSPORTER FAMILY PROTEIN 1 531 - -
Psa2g3945 535 PANTHER ALUMINUM-ACTIVATED MALATE TRANSPORTER 10 1 531 - -
Psa2g3945 535 Pfam Aluminium activated malate transporter 44 499 IPR020966 GO:0015743
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g3945 Psa-Chr2 412536329 412539048 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g3945 5 520 Miscellaneous Gene Families AT4G17970 60.971 0.0 645
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g3945 - - mtr:MTR_5g014310 939.102