Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g3941 ATGGCTTCAGCAACGACCTTGTTAGAAACACTAGGCAACTTAGAGAGAGATTCATTCTTATCTCTTCTCTCCAACCTCATCGGTGAATCCATACACGTGCAAAACAATCCACCGGAACTCATTCCTCAAGAGGATAGAGTAGTAAAGCATGTCTTAAACTCACTCCTACCGTTCAGCACCACCACCGGCGGTGGTCCCTTAATCCTCAACCATGTCACCTATTTTCCTGGCAGAGGTAACCTCATCGTCGAGTATCCTGGAACCGTTCCCGGCAAGATCCTCTCCTTCGTTGGCTGCCACATGGATGTTGTCACAGCAGATCCCAAAGATTGGGATTTTGATCCGTTTACTTTGAGCATCGACGGTGATAAGCTTAGGGGTCGTGGAACTACGGATTGTTTGGGACATGTGGCACTTGTTACTGAACTCATGAGGAAGCTTGGTGAAACAAAGCCAGATTTGAAATCAACTGTTGTTGCTGTTTTTATAGCGAATGAGGAGAGTGGTGTTGTAACGGGAGTTGGTATTGATGCACTTGTTCAACATGGTCTTCTCAATAAGCTAAAAGAAGGTCCCATGTTTTGGATAGATGTAGCTGATAAACAACCGTGTATTGGAACTGCCGGTATGATAGCTTGGAAGCTTCATGTCACCGGGAAACCTTTTCACAGCGGATTAACCGATAAGGCTATAAATCCACTAGAGCTAGCCATGGATGCAATAAAGGAAATTCAGCTGCAATTTTACAGGGACTTCCCACCCCATCCTCGTGAACAAGTTTATGGGTTTCCAATCCCTTCCACCATGAAACCAACCCAATGGAGTTATCCTGGAGGTGGAATCAATCAAATTCCAGGGGAATGTACTATTTCAGGAGATTTCAGGTTAACTCCATTCTATGATATGAAAGATGCAATGAAGAAGCTTCAAGAATACGTGGACGATATTAACGATAATATACAAAAGCTAGAATCTCGGGGTCCAGTTTCAAAATATGTCCTACTCGACGAAAAATTAAGGGGGAGACTTACTCTAACTTTTGATGAGGTTTTACCTGGAGTTGCATGTGATCTTAATTCGAGAGGCTTCCATGTTTTATGCAAAGCAACTGAGGAAGTAGTTGGACATGTAAAGCCTTTTTCGGTTACCGGAAGTTTGCCTCTCATTCGGGAACTTCAGGATGAAGGTTTTGATGTTCAGTCTTGTGGCTATGGTTTGATGGAAACTTACCATGCCAAGAATGAGTATTGTCTTTTTACAGATATGTCCCAAGGATACCAGGTGTTAGGGAGCATCATCGCGCAATTGGAAAATTGA 1317 0.4336 MASATTLLETLGNLERDSFLSLLSNLIGESIHVQNNPPELIPQEDRVVKHVLNSLLPFSTTTGGGPLILNHVTYFPGRGNLIVEYPGTVPGKILSFVGCHMDVVTADPKDWDFDPFTLSIDGDKLRGRGTTDCLGHVALVTELMRKLGETKPDLKSTVVAVFIANEESGVVTGVGIDALVQHGLLNKLKEGPMFWIDVADKQPCIGTAGMIAWKLHVTGKPFHSGLTDKAINPLELAMDAIKEIQLQFYRDFPPHPREQVYGFPIPSTMKPTQWSYPGGGINQIPGECTISGDFRLTPFYDMKDAMKKLQEYVDDINDNIQKLESRGPVSKYVLLDEKLRGRLTLTFDEVLPGVACDLNSRGFHVLCKATEEVVGHVKPFSVTGSLPLIRELQDEGFDVQSCGYGLMETYHAKNEYCLFTDMSQGYQVLGSIIAQLEN* 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g3941 438 PANTHER ACETYLORNITHINE DEACETYLASE 10 438 - -
Psa2g3941 438 SUPERFAMILY Bacterial exopeptidase dimerisation domain 209 318 IPR036264 -
Psa2g3941 438 Gene3D - 209 324 - -
Psa2g3941 438 Pfam Peptidase family M20/M25/M40 97 434 IPR002933 GO:0016787
Psa2g3941 438 Coils Coil 306 326 - -
Psa2g3941 438 Gene3D Zn peptidases 15 208 - -
Psa2g3941 438 PANTHER - 10 438 - -
Psa2g3941 438 Pfam Peptidase dimerisation domain 205 317 IPR011650 -
Psa2g3941 438 SUPERFAMILY Zn-dependent exopeptidases 15 436 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g3941 Psa-Chr2 412297749 412305204 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g3941 K01438 - gmx:100814676 762.681
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa2g3941 2 412297749 412305204 Psa2g3941 2 412297749 412305204 ECH