Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g3936 ATGAAGAACACTTGTATGCTACAATCTCGTCAATTGAAGCCTCGAAGTCCTAGCGAAGCTTTAATGGAAGAATCGATTAAAGTTTGTGGTACCTGTGGGGATGTGGGGAAGGAAGACTTGCTTGCTTGCTGCAAAAAGTGCACCGAAGGTGCACAACACACGTATTGTATGCGTGTTAAGCCGGATAAAGTTCCCGATAGTTGGACATGTGAAGAGTGTATGCTAAGGGAACAGACTTCCTCATCAATGCAGGATAAGGTTGCAAAAGCTTCCAGAAGAATGAAAGGACGCCTATCTGAGACTCCACTAAATCATCAATCTATTAAAGGTTCAATAAACTTTAGATCTCCCTATGACGGGAAAAGTAGGACAAATGATAAGGTTGGGAGAAGTCCCGTTTTTCCTGATGATAGAAAGGGGAAAGGTCCTAAATTGGTATCTGATTCTATGTCATTGAATAGTCTTATCTCAGAGAAATCAAATACTACTTGTTCTAAGGTTCTCCTAGCGGATGCTTATGGGTTACACGATCCTACAGCGTGCTTATTGATTTCTGACTCTGGTGTCAACGCAAGAAAAAATGTAAAGGAAACCATTTCTAGTGGTGATTCTTTATTTTCAGGTTCCAGTTTTCGTAATCTTGATGCTGTTGAAAGTTCAGCAAAATTGGATCATAAATTACAAAGTGATCACAACACTCATAAAGACTCAGATTGTCCAAATATAAATAAGAAAAAGAAGAGCCAGCAAGCGGAGGACCCCATGGAAGCTACTAGAGCTATAATCAAAGGCTCTGCGTTTGATGAATGGTCCAGATTGAGCGACAATACTCTGATTGAGGAAACACATCTTTTACATGGTCCTCTCAAGCCGGATTTGCATTCTTCATGGACAGGAAAATTTCAGATACACAACATTGAAGGGATTGCAAGGACTTGTGATGGGTTTCAAGCTAATCTATCAACTTTTTGTTCAGGGAAAATTCTTGATTTTGTGAACTGTCTTCCCGAGATTATTATACTGGAGGAACTCCCTCGATCGAGGATCTGGTTCTCTCTCTTTATGGGAAATCAAGTCACTAAGGAACATATTGACCTCTACTTTTTTGCTAAAGATGTTAATAGCTATTTGACATATTATAGAGGATTGATGGATTACATCACCAATAATGATTTGGCTCTGAAAGCAAATTTGGACGGGGCTGATCTTTTAATTTTTCCATCAAAGGTTCTGCCTAAGGAAAGCCAGTATTCGAGTAATTTTCCGTTCTTCTGGGGTGTATTCAAAGAACGAAAGGCGAATTACTCCACAAACTCAAACACACAGATCTCAAATGCTCTAGAGTCAGCAAATGGAGACAAGAAGAAATATCGGTCATTCAATCTGAATGCTGTCCCAGAAGATGTAGATGATGAAACAGAAGTAGCTGAAATTCTTGGAAGTGACAGCAAAAGTGGTACTAGAAATGCACATGTTGAAGAATCTGAAAAAGATATGAAGAACACTCGCTATTGTTCACAAGTCACCGCCCCTGCCTTGACTGCTGCGCCTGCTTCTGCTTCGACTGCTGCACCTGCCTCTGCTGCACCTGCCTCTGTTGCACCTTCCAATGTTCATCTTCATCATACAGGACAGGTAACATACTTCACATACACATCATCTCTGCTGCTTTCTAATTCTGAATTTTGGGGTGCCACTTTGCTGTTTTCATGGGGAGATTCCATTTTTGTGATATTTGAGAATGAGATGGCATTTTGCTGA 1761 0.4043 MKNTCMLQSRQLKPRSPSEALMEESIKVCGTCGDVGKEDLLACCKKCTEGAQHTYCMRVKPDKVPDSWTCEECMLREQTSSSMQDKVAKASRRMKGRLSETPLNHQSIKGSINFRSPYDGKSRTNDKVGRSPVFPDDRKGKGPKLVSDSMSLNSLISEKSNTTCSKVLLADAYGLHDPTACLLISDSGVNARKNVKETISSGDSLFSGSSFRNLDAVESSAKLDHKLQSDHNTHKDSDCPNINKKKKSQQAEDPMEATRAIIKGSAFDEWSRLSDNTLIEETHLLHGPLKPDLHSSWTGKFQIHNIEGIARTCDGFQANLSTFCSGKILDFVNCLPEIIILEELPRSRIWFSLFMGNQVTKEHIDLYFFAKDVNSYLTYYRGLMDYITNNDLALKANLDGADLLIFPSKVLPKESQYSSNFPFFWGVFKERKANYSTNSNTQISNALESANGDKKKYRSFNLNAVPEDVDDETEVAEILGSDSKSGTRNAHVEESEKDMKNTRYCSQVTAPALTAAPASASTAAPASAAPASVAPSNVHLHHTGQVTYFTYTSSLLLSNSEFWGATLLFSWGDSIFVIFENEMAFC* 587
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g3936 586 MobiDBLite consensus disorder prediction 120 142 - -
Psa2g3936 586 MobiDBLite consensus disorder prediction 478 500 - -
Psa2g3936 586 MobiDBLite consensus disorder prediction 227 253 - -
Psa2g3936 586 MobiDBLite consensus disorder prediction 227 254 - -
Psa2g3936 586 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 16 98 IPR013083 -
Psa2g3936 586 MobiDBLite consensus disorder prediction 115 142 - -
Psa2g3936 586 PANTHER - 175 463 - -
Psa2g3936 586 PANTHER - 8 145 - -
Psa2g3936 586 ProSitePatterns Zinc finger PHD-type signature. 29 73 IPR019786 -
Psa2g3936 586 SUPERFAMILY FYVE/PHD zinc finger 21 78 IPR011011 -
Psa2g3936 586 PANTHER - 8 145 - -
Psa2g3936 586 PANTHER - 175 463 - -
Psa2g3936 586 SMART PHD_3 28 74 IPR001965 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g3936 Psa-Chr2 412199620 412212440 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g3936 - - cam:101505946 379.022
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa2g3936 2 412199620 412212440 Psa2g3936 2 412199620 412212440 ECH