Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g3791 ATGTCAACTAGTTTCCAAAAGTTTTATGGTAGCTTTTCAAAGAAGCCAACCTCTCCACCAAAAAATCTAGCCCAGAAGAACAAAAGCTTTAAGCCGAGAAAACGGTCGCATGCAGAAACGAGTAATGAACCAAAGAAAGATGAAATGAAATATGTTTTTGAGAAATTTGACAAAAACAAAGATGGAAAAATCAGTCTTGAAGAGTACAAAGCAGCTGCAAAGTCTTTGGATAAAGGTGTTAGTGAGACTGAGGCAGTGAAAGCCTTCAAAGCCATGGATTCTGACAAAGATGGTTTCATAGACTTTAAAGAGTTCATGGAAATGTTCAATGGAGAGGGTAGTAACACAAAAGAAGATGAAATTAGGAGTGCTTTTCAAGTATTTGATATAAATGGTGATGGGAAAATAAGTGCTGAGGAATTGTCTCAAATGTTTAAGAGATTGGGAGAGAGTTGTAGCCTTAGTGCTTGTAAGAAAATGGTGAAAGGTGTTGATGGGGATGGAGATGGTTTTATAAACTTGAATGAGTTTACAAGGATGATGATGAATGGGAAGAAATTGGCCTAA 567 0.3668 MSTSFQKFYGSFSKKPTSPPKNLAQKNKSFKPRKRSHAETSNEPKKDEMKYVFEKFDKNKDGKISLEEYKAAAKSLDKGVSETEAVKAFKAMDSDKDGFIDFKEFMEMFNGEGSNTKEDEIRSAFQVFDINGDGKISAEELSQMFKRLGESCSLSACKKMVKGVDGDGDGFINLNEFTRMMMNGKKLA* 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g3791 188 CDD EFh 120 182 IPR002048 GO:0005509
Psa2g3791 188 SMART efh_1 84 112 IPR002048 GO:0005509
Psa2g3791 188 SMART efh_1 120 148 IPR002048 GO:0005509
Psa2g3791 188 SMART efh_1 156 184 IPR002048 GO:0005509
Psa2g3791 188 SMART efh_1 48 76 IPR002048 GO:0005509
Psa2g3791 188 ProSitePatterns EF-hand calcium-binding domain. 93 105 IPR018247 -
Psa2g3791 188 MobiDBLite consensus disorder prediction 1 25 - -
Psa2g3791 188 ProSiteProfiles EF-hand calcium-binding domain profile. 80 115 IPR002048 GO:0005509
Psa2g3791 188 ProSitePatterns EF-hand calcium-binding domain. 129 141 IPR018247 -
Psa2g3791 188 ProSitePatterns EF-hand calcium-binding domain. 57 69 IPR018247 -
Psa2g3791 188 PANTHER EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEIN 3 187 - -
Psa2g3791 188 ProSiteProfiles EF-hand calcium-binding domain profile. 152 187 IPR002048 GO:0005509
Psa2g3791 188 MobiDBLite consensus disorder prediction 1 46 - -
Psa2g3791 188 CDD EFh 48 109 IPR002048 GO:0005509
Psa2g3791 188 Pfam EF hand 48 75 IPR002048 GO:0005509
Psa2g3791 188 Gene3D - 114 187 - -
Psa2g3791 188 ProSiteProfiles EF-hand calcium-binding domain profile. 44 79 IPR002048 GO:0005509
Psa2g3791 188 PANTHER CALCIUM-BINDING PROTEIN CML34-RELATED 3 187 - -
Psa2g3791 188 SUPERFAMILY EF-hand 40 182 IPR011992 -
Psa2g3791 188 Pfam EF hand 164 181 IPR002048 GO:0005509
Psa2g3791 188 Gene3D - 1 113 - -
Psa2g3791 188 PRINTS Recoverin family signature 88 109 - -
Psa2g3791 188 PRINTS Recoverin family signature 112 131 - -
Psa2g3791 188 PRINTS Recoverin family signature 134 152 - -
Psa2g3791 188 ProSitePatterns EF-hand calcium-binding domain. 165 177 IPR018247 -
Psa2g3791 188 Pfam EF-hand domain pair 87 146 IPR002048 GO:0005509
Psa2g3791 188 ProSiteProfiles EF-hand calcium-binding domain profile. 116 151 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g3791 Psa-Chr2 402414691 402416138 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g3791 42 181 EF-hand Containing Proteins AT2G15680 47.857 3.71e-44 143
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g3791 K13448 - gmx:100790495 254.218
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa2g3791 2 402414691 402416138 Psa2g3791 2 402414691 402416138 ECH