LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Psa2g3727	ATGTCGCCGGCGCCGGAATATTCCTTTGCCGTTGAATATGATGGACCTCCATTAGGTTACGATCTTCCCCGAGCAGTTCCAATTACCGTCGACGACATTCCGGTGGCAGCTGTTGTTTCTCAGGTTCCTCTCTCTGAAACTCTCTCTTTACCGGTTGTGCAGCCTCTATTACCACCGCACCACCATACTGTGAAAGAGCTTAGACCATTAAGCTCCGAATCTAGGGTTTCTAAAGAGCTTGAATTAGCGTTAGAGAGAACAGTTTCTCCTACTTCTGTTATTGCCTTCGATCGCCGAGCTTCTCAGAGTAATGTTTGTGAGCTTTCCGGTGAGTTAAGCAGCTCCGGGCCGTTTGATTTCTCGAACGGGAATGGAGTCTCCGGCGAGTTTTCAGATGTTGGTGATTCTTCGAGGTTGCTTGAAGAATCAAGCTCGAGTGAGTTACCGAGTGGAGTTAGTAGGAGCACTAGAACTAGAAGCTCTAGTACTTTGGAGTTTAGTGCTTTGAGGGTTTCGAATGATGATGAGAAAGGGAGTTTTGATTTTAACGAGTTAAACCAGCAAGATTGGGGTTCAGCTGAGTCAGTGTTGAGTTTAGAGTATCCATCAACTCGGGTTTCTTCTTTGAAAGCGGAGGATTGTGATGCTAAACGTGTTCCTGCTGTTACTTTCAATGTGGACTCTGATGACGATGAGGATGCTTTGCATGATGAATTTGATGTTGAGGAAACTGTGACTAGACCTGTTAAAAGGGAGCCTCTAACAAAGGGAAAGAAAGGGTCTTGTTATAGATGTTTTAAGGGGAGTAGGTTCACTGATAAGGAGGTTTGTTTGGTTTGTGATGCAAAGTATTGTAGTAATTGTGTGCTTAGAGCAATGGGGTCTATGCCTGAAGGTAGAAAATGTGTTACTTGCATTGGATTTTCTATAGACGAATCCAATAGAGCGAATTTAGGGAAATGCTCTAGGATGCTTAAGCGATTGCTTAGTCAGTTGGAGGTTAGACAGATAATGAAAGCTGAGAAGTTTTGTGAAGTAAATCAGCTTCCACCCGAATACATTTGTGTGAATGGGAAGCCACTTTCATATGAAGAACTCGTTACCTTGCAGAACTGTCCAAATCCTCCAAAGAAGCTTAAGCCAGGAAACTATTGGTATGATAAAGTGTCTGGATTTTGGGGGAAGGAAGGACAGAAGCCTTCCAGTATAATTAGTGCTCATCTGAATGTTGGAAGTCCCATTCAGCCAGATGCTAGCAATGGAAACACACAGGTTTTCGTAAATGGTCGAGAAATAACAAAAGTGGAGCTTCGGATGTTGCAGTTGGCAGGAGTTCAGTGTGCAGGCAACCCACATTTTTGGGTCAATGAGGATGGTTCCTATCAAGAAGAGGGACAGAAGAATACACGAGGGTATATTTGGGGAAAGGCTGGAACCAAGCTTGTATGTGCATTCCTGTCCCTGCCAGTTCCCTCTAAATCTTCAAATTCTCTTGGAGAACAACACTCCAATATGGCCAGCAGATCAATTCCTGACTACCTCGAGCATGGAATTGTTCAGAAGCTTCTCTTGGTTGGTTGCAGTGGCTCTGGGACCAGCACTATTTTTAAGCAGGCCAAGATTCTCTATAAAAGCATTCCCTTTTCAGAAGATGAGCATGAAAATATATTATTGACCATTCAGACCAATGTTTATACTTACCTTGGCATACTCCTTGAGGGCCGCGAGCGTTTTGAGGATGAAATATTGGCAGATTTAAAGGAAAGACAAACTTCCGTGCTTGATACTACAGGAACCAGTCCTAACCCTGACAAGACAATATATTCCATTGGTCCAAGGCTGAAAGCATTCTCTGATTGGTTGCTAAAAACTATGGCATCGGGCAAACTGGACGCTATCTTTCCTGCCGCTACTCGTGAATATGCACCATTGATCGAGGAATTGTGGAATGATGCTGCCATTAAGGCCACATACGAAAGAAAAAGTGAATTGGAAATGCTTCCTAGTGTTGCCAGTTATTTCTTAGAGCGGGCTGTCAAAATATTAAGGACAGATTATGAGCCCTCGGATTTAGATATCCTGTATGCTGAAGGAGTCACTTCATCAAATGGGTTGGCTTGTGTGGAGTTTTCATTTCCCCAATCAGCTCCCGAGGAAACTGTGGACACTACTGATCAATATGATTCTTTGGCTAGGTATCAACTAATTAGAGTGCATTCAAGGGGGCTAGGAGAAAATTGCAAGTGGCTAGAGATGTTTGAGGATGTTGAAATGGTCATCTTCTGTGTTTCCTTGAGTGACTATGATCAGTTTTCTGTTGATGGAAATGGTTATCTCACTAACAAGATGATATTGAGCATGAAGTTTTTTGAAACCATTGTCACACATCCAACTTTTGAGCAAATGGAATTCCTGTTGATATTGAACAAATTTGATCTTTTTGAGGAGAAAGTCGAACAAGTTCCTTTGACCAAGTGTGATTGGTTCTCTGATTTTCATCCAATAACTAGCCGTAATCGCACCAACAGCAATAGTAACAGCATTAATAGTAACCCCTCCCTTGGTCAGCTTGCTTCCCATTACATAGCGGTTAAGTTTAAAAGGCTTTATTCATCGGTTACGGGACGAAAGTTGTATGTTTCTGTGGTGAAAGGGTTGGAACCAGATAGTGTTGATGCATCCCTTAAATATGCCAAGGAAATTTTGAAGTGGAGTGAAGAGAAGCAAAACTTTAACTCAAGTGAGTACTCGATGTATAGCACTGAGGCGAGTTCATTATCTCATTGA	2787	0.4255	MSPAPEYSFAVEYDGPPLGYDLPRAVPITVDDIPVAAVVSQVPLSETLSLPVVQPLLPPHHHTVKELRPLSSESRVSKELELALERTVSPTSVIAFDRRASQSNVCELSGELSSSGPFDFSNGNGVSGEFSDVGDSSRLLEESSSSELPSGVSRSTRTRSSSTLEFSALRVSNDDEKGSFDFNELNQQDWGSAESVLSLEYPSTRVSSLKAEDCDAKRVPAVTFNVDSDDDEDALHDEFDVEETVTRPVKREPLTKGKKGSCYRCFKGSRFTDKEVCLVCDAKYCSNCVLRAMGSMPEGRKCVTCIGFSIDESNRANLGKCSRMLKRLLSQLEVRQIMKAEKFCEVNQLPPEYICVNGKPLSYEELVTLQNCPNPPKKLKPGNYWYDKVSGFWGKEGQKPSSIISAHLNVGSPIQPDASNGNTQVFVNGREITKVELRMLQLAGVQCAGNPHFWVNEDGSYQEEGQKNTRGYIWGKAGTKLVCAFLSLPVPSKSSNSLGEQHSNMASRSIPDYLEHGIVQKLLLVGCSGSGTSTIFKQAKILYKSIPFSEDEHENILLTIQTNVYTYLGILLEGRERFEDEILADLKERQTSVLDTTGTSPNPDKTIYSIGPRLKAFSDWLLKTMASGKLDAIFPAATREYAPLIEELWNDAAIKATYERKSELEMLPSVASYFLERAVKILRTDYEPSDLDILYAEGVTSSNGLACVEFSFPQSAPEETVDTTDQYDSLARYQLIRVHSRGLGENCKWLEMFEDVEMVIFCVSLSDYDQFSVDGNGYLTNKMILSMKFFETIVTHPTFEQMEFLLILNKFDLFEEKVEQVPLTKCDWFSDFHPITSRNRTNSNSNSINSNPSLGQLASHYIAVKFKRLYSSVTGRKLYVSVVKGLEPDSVDASLKYAKEILKWSEEKQNFNSSEYSMYSTEASSLSH*	929

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Psa2g3727	928	SUPERFAMILY	Transducin (alpha subunit), insertion domain	548	696	IPR011025	GO:0007165
	Psa2g3727	928	MobiDBLite	consensus disorder prediction	132	159	-	-
	Psa2g3727	928	ProSiteProfiles	G-alpha domain profile.	518	919	IPR001019	GO:0003924\|GO:0007186\|GO:0019001\|GO:0031683
	Psa2g3727	928	Gene3D	-	549	693	IPR011025	GO:0007165
	Psa2g3727	928	Gene3D	-	694	910	IPR027417	-
	Psa2g3727	928	PANTHER	EXTRA-LARGE GTP-BINDING PROTEIN	7	926	-	-
	Psa2g3727	928	SMART	galpha_1	489	886	IPR001019	GO:0003924\|GO:0007186\|GO:0019001\|GO:0031683
	Psa2g3727	928	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	520	903	IPR027417	-
	Psa2g3727	928	Pfam	G-protein alpha subunit	519	901	IPR001019	GO:0003924\|GO:0007186\|GO:0019001\|GO:0031683
	Psa2g3727	928	PRINTS	Alpha G protein (transducin) signature	521	536	IPR001019	GO:0003924\|GO:0007186\|GO:0019001\|GO:0031683
	Psa2g3727	928	PRINTS	Alpha G protein (transducin) signature	756	784	IPR001019	GO:0003924\|GO:0007186\|GO:0019001\|GO:0031683
	Psa2g3727	928	PRINTS	Alpha G protein (transducin) signature	804	813	IPR001019	GO:0003924\|GO:0007186\|GO:0019001\|GO:0031683
	Psa2g3727	928	PANTHER	GTP-BINDING PROTEIN ALPHA SUBUNIT	7	926	IPR001019	GO:0003924\|GO:0007186\|GO:0019001\|GO:0031683
	Psa2g3727	928	CDD	G-alpha	520	904	IPR001019	GO:0003924\|GO:0007186\|GO:0019001\|GO:0031683

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Psa2g3727	Psa-Chr2	397888266	397894891	Dispersed/Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Psa2g3727	-		-	aprc:113868364	1564.67

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Psa2g3727	2	397888266	397894891	Psa2g3727	2	397888266	397894891	ECH