Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g3718 ATGCTATTCAACAGGTTCTTGGTAACAGTAATGGGTTTGGCAATTCCCTGGAGCATAACATTATTCTTGGTAGATGCTTACTCTGTCTTCGTACAATGTTTGCCGATTCAACGGAGGCTCATAATGATAATCGTTTTCGGAGACATGGTTATGTCATATCTTTCATTAGCTGCAGCATGTTCTGCAGCAAGTGTGACAGATCTTCTGCATGAAGCTGGTAGATCACATTGCCCTACAAAGTTATGTGGTAGATATCAATTGTCTGCTGCTATGGCATTTTTGTCTTGGTTTCTTTCATTAGCTTCATGTCTTTTTAATTTTTGGATTTTACCTTCTCTGTAA 342 0.386 MLFNRFLVTVMGLAIPWSITLFLVDAYSVFVQCLPIQRRLIMIIVFGDMVMSYLSLAAACSAASVTDLLHEAGRSHCPTKLCGRYQLSAAMAFLSWFLSLASCLFNFWILPSL* 114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g3718 113 PANTHER CASP-LIKE PROTEIN 5C1 6 112 - -
Psa2g3718 113 Pfam Casparian strip membrane protein domain 5 98 IPR006702 -
Psa2g3718 113 PANTHER CASP-LIKE PROTEIN 5B3 6 112 IPR045009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g3718 Psa-Chr2 397403659 397404776 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g3718 - - gmx:100306215 171.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa2g3718 2 397403659 397404776 Psa2g3718 2 397403659 397404776 ECH