Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g3716 ATGGGGAACTGTACCTCCTCCGATTCAACACGCGTTGCAACGGCGAAGCTTATTCTCCAAGACGGAAGGTTACGAGAGTTTTCTTATCCTGTCAAGGTTTCTTACCTCTTACAGGAGCATCCGTCGTGTTTTATATGTAACTCCGACGAGATGGATTTCGACGATGTTGTCACCGCCGTCGATGAAAACCAAGTGTTGCAACTAGGACAGCTTTATTTCGCTCTTCCGTTGAGTTGGTTGAGGCAACCGTTGCAGGCTCAGGAGATGGCTGCATTGGCCGTTAAAGCGAGTTCCGCTCTCATGAAAAGTGGCGCTTCCTATAAATGCGGTTGTGGCGGGAAACAGATTATGTTCTCCGGTGAGTGTGACGCTAAGCGTGTTTCACCGGCTGGCGTTTCTGGCGGTGGTACTGTACAGAGATCGAGAAGAGAGGGAAACAGATTATGTTCTCCGGTGAGTGTGACGCTAAGCGTGTTTCACCGGCTGGCGTTTCTGGCGGTGGTACTGTACAGAGATCGAGAAGAGGAAGAAATACAAGAAGCGGTAGTGCCGGTGTTGAGAAGTTTGCGGCGTTGTTGA 579 0.5026 MGNCTSSDSTRVATAKLILQDGRLREFSYPVKVSYLLQEHPSCFICNSDEMDFDDVVTAVDENQVLQLGQLYFALPLSWLRQPLQAQEMAALAVKASSALMKSGASYKCGCGGKQIMFSGECDAKRVSPAGVSGGGTVQRSRREGNRLCSPVSVTLSVFHRLAFLAVVLYRDREEEEIQEAVVPVLRSLRRC* 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g3716 192 PANTHER DUF4228 DOMAIN PROTEIN-RELATED 1 144 - -
Psa2g3716 192 Pfam PADRE domain 1 137 IPR025322 -
Psa2g3716 192 PANTHER HTH-TYPE TRANSCRIPTIONAL REGULATOR 1 144 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g3716 Psa-Chr2 397168338 397169944 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g3716 - - gmx:100787837 197.208
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa2g3716 2 397168338 397169944 Psa2g3716 2 397168338 397169944 ECH
Psa2g3716 2 397168338 397169944 Psa4g2099 4 163300548 163302036 PCT