Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g3698 ATGTCGATGAATTCAAGTCCTTTTTCTCGCAAGTTCAACATCTTGCGACTTCGCATTCAAATTCGTTTCTATACCCGTCGCCGTGACCCTTTCCCCACAAAAATTTGTCACTACCTAAACCGTGCAAAGCTTATAGATTCAATTCGACTTTCTCTACGCTCTAATAACCCTAATTCCACACTCCCCACTCTCATAAGCCACCGTTTATTCGACTCTTTTGTTGTCACTCATGCACTTCGTTCCGCACCTTGTGCAGATTCTGCACTTTCCCTCATTCATACTCTCGAGAAAACAGAAAGTACACATTTTTCACATACCCAGAATACCCTTCATGCTCTTGCCACTGTGCTAGCAAAATCTGGTAAGTGTGATGAGCTTAAATCCCTCATTGATGATATACAAAGTAAACGGTTTGGAAATGTTAAGATCAGTTTTATGAATCTAATGCAGTGGTATGCTGTAGCAAAGGACATTGATTCTGTTCTTGAGGTTTGGGATCGGTATAGACTTGATGCAAGTAACCGTGTATGTACTGAATCTTATAACATTGTTATGTCTCTTTATGTAGAAATGGGTATGGATTTTGAAGCTGTTGAAGTGTTTCATAAGATGGTTGATGAAGGGTCACTACCCAATTGTAGAAGCTATAGTATAATAATTGAGCACCTTGTGAAATCTGCGAAGTTTTTAGAAGCCATTGAGGTTTTTACTTTGTTGCCTTTGATGAGGATTAAACGTACTTTGAAACAGTACTCAGTTCTAATTGAAGGTTTGGTTGGTAGTAAAATGTTTGATGAAGTTGGAGTTTTAGTTACCGAGATGCAAGTTGATGGAATATTACCTAATCGAACCGTGAGTTTGTTATTGAAGCAGGTGAAGGATGAGGGATTTCTTAAGGATATGGATGATTTGTTTACAGAAATTTGCCCGGATGAAAGAATCAAGAATGTAAGATATTCTAATGATAGTAGTGATGAGGATGAGAATGACGACGAGGGTGAAAATGAAAACGGGAATGATGCTTTGCAATGTGATCATGTAAATGGGATCCGCTTGAAACCCTGGCTGGATCCGCGGTGTCTGGCTAGTGCCTTACAGAATTGGAGTCCTGATGAGGTATCAGCGCTAGAGGATGCAAAGTTTGTATGGACAACTAGGTTGGTGTGCAAGATACTTAGAAGTTTCAATAAACCAGATACTGCGTGGAATTTCTTCTGCTGGGTTGCGGATCAACCTGGATTTACTCATAACATATACACGGTGCAAAGAATCATGACCTTTCTAGCTCGCCATGGACGTACTGAGTTAGTTGATAAACTCATCTCCAAGATCAGAATGGAAGGAATGAGACTACCATTCAGCACCTTAAGGTTAATCATTGACTTTTATGGGATTTCAAAAAATGCTGATGCTGCTCTGAAGGTTTTCAACGATGATCGAATACTTTGTGGGTCTATATCAAAAGTTAACATGATGCTTCTGTTTTCGTCTCTTTTAAGAACGTTAGCCAAGTGTGGTAAGGATTCCGATGCCCTGGAAATGCTTGATGAGATGATTTTAAATGGCATTTGCCCAGATATCCAAACATTTTCAGGTCTAATGCAGTATTTTTCACAACTTGGTGACATTAAAACTGCACAAACACTCTTTTCAATGCTCAGACAGAGTGGTTTTGAACCAGACGCGTATCTGTTTAAGGTACTAATCGAAGGTTATTGCAAGTCGAAAAGAGCTGCACTGGCTTGGAGGCTATTTGAAGACATGAAGAATTCGGGGTTGATGCCTGATTTTTCCACCAAAGAGTTGCTTGTGAAGAGCCTCTGGAGAGAAGGGAGACGAAGAGAGGCCGCAGCGGTAGAAGAGAGCTGTGAGGAAGTGAATATGGTTCTTCCACCTGCATTGCCTGGTCATGTATGGACTGTCAGTTCTGCAGATCTCACAAGAGTTTTTAACATTTATTCAAATTCTTTTACTTCAAAAGGTGACTAG 1989 0.4017 MSMNSSPFSRKFNILRLRIQIRFYTRRRDPFPTKICHYLNRAKLIDSIRLSLRSNNPNSTLPTLISHRLFDSFVVTHALRSAPCADSALSLIHTLEKTESTHFSHTQNTLHALATVLAKSGKCDELKSLIDDIQSKRFGNVKISFMNLMQWYAVAKDIDSVLEVWDRYRLDASNRVCTESYNIVMSLYVEMGMDFEAVEVFHKMVDEGSLPNCRSYSIIIEHLVKSAKFLEAIEVFTLLPLMRIKRTLKQYSVLIEGLVGSKMFDEVGVLVTEMQVDGILPNRTVSLLLKQVKDEGFLKDMDDLFTEICPDERIKNVRYSNDSSDEDENDDEGENENGNDALQCDHVNGIRLKPWLDPRCLASALQNWSPDEVSALEDAKFVWTTRLVCKILRSFNKPDTAWNFFCWVADQPGFTHNIYTVQRIMTFLARHGRTELVDKLISKIRMEGMRLPFSTLRLIIDFYGISKNADAALKVFNDDRILCGSISKVNMMLLFSSLLRTLAKCGKDSDALEMLDEMILNGICPDIQTFSGLMQYFSQLGDIKTAQTLFSMLRQSGFEPDAYLFKVLIEGYCKSKRAALAWRLFEDMKNSGLMPDFSTKELLVKSLWREGRRREAAAVEESCEEVNMVLPPALPGHVWTVSSADLTRVFNIYSNSFTSKGD* 663
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g3698 662 MobiDBLite consensus disorder prediction 324 338 - -
Psa2g3698 662 MobiDBLite consensus disorder prediction 319 340 - -
Psa2g3698 662 Pfam Pentatricopeptide repeat domain 495 537 IPR002885 -
Psa2g3698 662 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 526 560 IPR002885 -
Psa2g3698 662 TIGRFAM PPR: pentatricopeptide repeat domain 565 596 IPR002885 -
Psa2g3698 662 TIGRFAM PPR: pentatricopeptide repeat domain 495 527 IPR002885 -
Psa2g3698 662 TIGRFAM PPR: pentatricopeptide repeat domain 180 213 IPR002885 -
Psa2g3698 662 Gene3D Tetratricopeptide repeat domain 363 490 IPR011990 GO:0005515
Psa2g3698 662 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 491 525 IPR002885 -
Psa2g3698 662 Gene3D Tetratricopeptide repeat domain 145 351 IPR011990 GO:0005515
Psa2g3698 662 Gene3D Tetratricopeptide repeat domain 491 642 IPR011990 GO:0005515
Psa2g3698 662 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 561 595 IPR002885 -
Psa2g3698 662 PANTHER OS01G0167750 PROTEIN 17 660 IPR044175 -
Psa2g3698 662 Pfam PPR repeat family 567 607 IPR002885 -
Psa2g3698 662 Pfam PPR repeat family 178 224 IPR002885 -
Psa2g3698 662 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 177 211 IPR002885 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g3698 498 662 Glycosyltransferase AT1G05670 26.667 4.40e-11 64.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g3698 - - cam:101514749 1087.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa2g3698 2 396192472 396194460 Psa2g3698 2 396192472 396194460 ECH