Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g3688 ATGATTAAACTATTTAAAGTAAAGGAAAAGCAAAGAGAACTTGCAGAAAATACCAGTAATGGAGTACCTGTCAAGAAGCAAAGTGCTGGCGAGTTGCGTCTTCACAAAGATATCAGTGAGCTGAATCTACCAAAATCTTGTACCATGCAATTCCCCAATGGCAAAGATGACCTCATGAACTTCGAAGTTTTAATTCGACCTGATGATGGATATTACCTAGGTGGCACTTTTTTGTTTTCCTTCCATGTGTCTCCCATCTATCCACATGAAGCACCCAAGGTGAAGTGCAAGACAAAGGTCTACCATCCAAATATTGATTTGGAAGGGAACGTCTGTCTCAACATCTTAAGAGAAGACTGGAAACCTGTCCTGAATATAAACACTGTTATCTATGGCTTGTATCATCTCTTTACGGAGCCAAATTACGAGGATCCCCTGAATCATGATGCAGCTGCCGTGTTGAGAGATAACCCAAAGATGTTTGAATCTAATGTGAGGAGGGCAATGTCTGGTGGGTATGTGGGGCAAACCTTTTTCCCACGCTGTATGTAA 552 0.4149 MIKLFKVKEKQRELAENTSNGVPVKKQSAGELRLHKDISELNLPKSCTMQFPNGKDDLMNFEVLIRPDDGYYLGGTFLFSFHVSPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDWKPVLNINTVIYGLYHLFTEPNYEDPLNHDAAAVLRDNPKMFESNVRRAMSGGYVGQTFFPRCM* 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g3688 183 CDD UBCc 33 167 IPR000608 -
Psa2g3688 183 PANTHER UBIQUITIN-CONJUGATING ENZYME E2 11 173 - -
Psa2g3688 183 SUPERFAMILY UBC-like 25 181 IPR016135 -
Psa2g3688 183 SMART ubc_7 32 174 - -
Psa2g3688 183 Gene3D Ubiquitin Conjugating Enzyme 25 183 IPR016135 -
Psa2g3688 183 ProSitePatterns Ubiquitin-conjugating (UBC) active site signature. 101 116 IPR023313 -
Psa2g3688 183 Pfam Ubiquitin-conjugating enzyme 33 168 IPR000608 -
Psa2g3688 183 PANTHER - 11 173 - -
Psa2g3688 183 ProSiteProfiles Ubiquitin-conjugating (UBC) core domain profile. 29 174 IPR000608 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g3688 Psa-Chr2 395225815 395230180 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g3688 K10579 - gmx:100783122 369.007
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa2g3688 2 395225815 395230180 Psa2g3688 2 395225815 395230180 ECH