Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g3655 ATGAAGTGTCCGTACTGTTCGGCGGCGCAGGGTCGTTGCGCCACCACAACCACCGGAAAATCCATCACCGAATGCACATCTTGCGGCCGCGTCGTAGAAGAACGACAATCCCATCCCCACCACATATTCCACCTCCGCGCCCAAGACAACCCTCTCTGTCTCGTCACATCAGATCTCCCTCCTCCCACACTCCATCAAAACAACCAACAACAAAACACCAACACCAACGAAAACGAAGAAGAAGACCCATTCGAGCCCACGGGCTTCATAACCGCCTTCTCCACATGGTCCTTAGAGCCAAACCCGCTCTACCTTCAATCTTCTCTCTCGTTCTCCGGCTACCTCGCCGAACTCGAACGGACGCTTGAGTCCTCTTCTTCTGCTTCCTCGTCTACCGTTGTTGTGGATAACCTTAGGGCTTATATGCAGATTATCGATGTTTCTTCGATACTTGGATTGGATTGTGATATTTGTGATCACGCGTTTCAATTGTTTAGGGATTGTTGTTCTGCTACTTGTTTGAGGAATCGGAGTGTTGAAGCGCTTGCTACTGCTGCTCTTGTTCAGGCCATTAGAGAAGCTCAAGAACCTAGAACCCTTCAGGAAATTTCAATTGCAGCTAATGTGGCACAGAAGGAAATAGGGAAATACATCAAGATATTGGGAGAAGCTTTACAGCTAAGTCAACCTATTAACAGCAATTCTATATCAGTTCATATGCCAAGATTTTGCACTCTTCTTCAGCTCAATAAATCTGCTCAGGAACTGGCTACTCATATTGGAGACGTTGTGATCAACAAATGCTTCTGCACTCGCAGGAATCCAATTAGCATCTCTGCTGCCGCCATATATTTGGCCTGCCAACTAGAAGACAAACGGAAAACTCAGGCCGAAATTTGCAAAGTAACTGGTCTTACTGAAGTCACTCTCCGAAAAGTATACAAAGAATTACTGGAGAATTGGGATGATTTACTTCCCTCTAATTACACCCCAGCTGTTCCTCCTGAGCGGGCATTTCCCACGACCCTAATTGCTTCTGGACGTTCAACAACTAAGATTGATGCTATAGAAGTTACTTCTTTGGACTCAGAAAATTTGCCGGAATTTAAACCAAGTAAACCTAACGAGGTCTCGGTCATGGTCCATCAGTCAAGAGGAAAGGATGAGGCCGATGGTAAAAGCAATGCTCGTGCAAGCAATTCCACAGCTATTCAACAGTCAACCTTTTGGCAGTCCCAACTTCCCAGTGCAACACACAATCATCAAAATCAGAATATTTTAGAATCAATGGATATTGATGCGTTGCAACGAAACCACCAACAACCTGAACCCATGGTAGAGGTCACAAATGGTGCTGCCATTGCTAGTTCGCTAAACTCAAACCAACTTTACAGTCCTCCTGCTTCAAGTTCAAGCTCTATTATGAGGTCGTTTTCAGCTCCTCCTTCATCTGCTCCTCCAAATATTCGACTAATGCAGTCCTCCAAGACAATGCCGGGTTTTCCAGAATACTAA 1515 0.4554 MKCPYCSAAQGRCATTTTGKSITECTSCGRVVEERQSHPHHIFHLRAQDNPLCLVTSDLPPPTLHQNNQQQNTNTNENEEEDPFEPTGFITAFSTWSLEPNPLYLQSSLSFSGYLAELERTLESSSSASSSTVVVDNLRAYMQIIDVSSILGLDCDICDHAFQLFRDCCSATCLRNRSVEALATAALVQAIREAQEPRTLQEISIAANVAQKEIGKYIKILGEALQLSQPINSNSISVHMPRFCTLLQLNKSAQELATHIGDVVINKCFCTRRNPISISAAAIYLACQLEDKRKTQAEICKVTGLTEVTLRKVYKELLENWDDLLPSNYTPAVPPERAFPTTLIASGRSTTKIDAIEVTSLDSENLPEFKPSKPNEVSVMVHQSRGKDEADGKSNARASNSTAIQQSTFWQSQLPSATHNHQNQNILESMDIDALQRNHQQPEPMVEVTNGAAIASSLNSNQLYSPPASSSSSIMRSFSAPPSSAPPNIRLMQSSKTMPGFPEY* 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g3655 504 MobiDBLite consensus disorder prediction 463 504 - -
Psa2g3655 504 Gene3D - 238 334 - -
Psa2g3655 504 SUPERFAMILY Cyclin-like 139 229 IPR036915 -
Psa2g3655 504 PANTHER TRANSCRIPTION INITIATION FACTOR IIB-RELATED 1 500 IPR000812 GO:0006352|GO:0070897
Psa2g3655 504 MobiDBLite consensus disorder prediction 463 495 - -
Psa2g3655 504 CDD CYCLIN 140 221 IPR013763 -
Psa2g3655 504 CDD CYCLIN 240 318 IPR013763 -
Psa2g3655 504 PANTHER PLANT-SPECIFIC TFIIB-RELATED PROTEIN 1 1 500 - -
Psa2g3655 504 SMART cyclin_7 142 223 IPR013763 -
Psa2g3655 504 SMART cyclin_7 238 319 IPR013763 -
Psa2g3655 504 Pfam Transcription factor TFIIB repeat 238 319 IPR013150 GO:0017025
Psa2g3655 504 Pfam Transcription factor TFIIB repeat 140 221 IPR013150 GO:0017025
Psa2g3655 504 SUPERFAMILY Cyclin-like 236 334 IPR036915 -
Psa2g3655 504 MobiDBLite consensus disorder prediction 372 401 - -
Psa2g3655 504 PRINTS Transcription initiation factor IIB signature 18 38 IPR000812 GO:0006352|GO:0070897
Psa2g3655 504 PRINTS Transcription initiation factor IIB signature 184 203 IPR000812 GO:0006352|GO:0070897
Psa2g3655 504 PRINTS Transcription initiation factor IIB signature 210 225 IPR000812 GO:0006352|GO:0070897
Psa2g3655 504 PRINTS Transcription initiation factor IIB signature 239 257 IPR000812 GO:0006352|GO:0070897
Psa2g3655 504 PRINTS Transcription initiation factor IIB signature 273 289 IPR000812 GO:0006352|GO:0070897
Psa2g3655 504 PRINTS Transcription initiation factor IIB signature 305 319 IPR000812 GO:0006352|GO:0070897
Psa2g3655 504 Gene3D - 1 223 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g3655 K03124 - gmx:102662353 793.882
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa2g3655 2 393234649 393238098 Psa2g3655 2 393234649 393238098 ECH