Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g3611 ATGTCCGCCGCTAAATTAACCTCATGCGTCGCCGTAACAGCAGCTGCAGTGGCTTCAATGACCACTCGCTCCGATCCTGCTTACTCCGAATCTTTCTTCCGATTCCCTTTTTTCTCTTCTTCACCTTCCAATTCACCTTCACCGAAGGACCAATCATCTGACACTAAGTCGGAATCTTCGTCGCCTGAGGAACCTAACAACTCGGGTTTTAATCCTGAATCGTTAGAAATAGCTGCCGAAGCTCTCCGTAAAATTAATAATTCACCCTACCGTAAACAGGAAACAACTCGACTAGCTGAGCTAGATGCTGAAAAAGTTTATTATGAACTTATTCAGTCTCAAGGAGATATTGACAGGCTGCGTAAAATGGCTGAAGAACAACGCAATCTAATACAAGAGCAGAACCAGAGGCAGGCTCAGGTGTTGCGATTTGAAGATGAATTGGCAAGGAAAAGAATGCAGACAGATCATGAAAATCAACGGCAACATAATGTTGAGTTGGTCAAGATGCAAGAGGATTCTTCTGTAAGAAAGGAGCAAGCAAGACAGGCTACTGAAGAACAGATTCAATCTCAGAAGCGTCAGACTGAGAGAGAGCGAGCTGAAATAGAAAGAGAAACCATCAGAGTTAAGAAAATGGCAGAGGCTGAAGCCCGAGCCCATGAAGCAAAATTGACTGAGGATCATAACAGGAGAATGCTTATAGATCGAATGCATGGGGAAAGAGATAAATGGCTTGCTGCAATTAATGCTACTTTTAGTCATATTGAAGGTGGTCTAAGGGTCTTATTGACCGATAGGGACAAACTGATTATGACTGTTGGAGGAGCAACTGCATTAGCTGCAGGAGTATATACAACAAGAGAAGGTGCAAAAGTTACATGGGGCTATATTAATCGGATTTTGGGGCAGCCATCATTGATCCGAGAGTCATCCATGGCAAAGTTTCCAGGATCAAGGATCATATCTCAAGCCAAAAATAAAGTTTTAAATTATAGTACCTTGGCCAGGGCAGAGAAGCCTGTTGGGAGTCAAAATGGTCTTGGAAATGTAATCTTGCATCCATCATTGCAGAGAAGAATAGTACATCTAGCACGGGCAACATCAAATACGAAGGCCCATCAGGCACCATTTCGTAACATGCTTTTTTATGGTCCTCCTGGGACTGGTAAAACCATGGTTGCAAGAGAAATAGCTAGAAAATCGGGTTTGGATTATGCAATGATGACTGGAGGAGATGTTGCACCTCTGGGCCCACAGGCTGTTACCAAAATTCATGAGATATTTGATTGGGCCAAGAAATCTAAAAGAGGCCTATTGCTTTTTATTGACGAGGCAGATGCTTTCCTTTGCGAGCGTAACAGCTCATATATGAGTGAAGCTCAACGAAGTGCCCTAAATGCATTGCTTTTCAGAACTGGTGATCAGTCTAGAGACATAGTACTTGTCCTTGCCACAAACAGACCAGGAGATCTTGATAGTGCAATTACTGATCGTATTGATGAAGTAATTGAATTCCCGCTTCCAGGAGAGGAGGAACGTTTCAAGTTATTGCAGCTCTATTTGAACAAGTATCTATGTGATGAAAGTAACGACTCCAAGGGGGGCTTATTTTTGAAGAAGCAGCCCCAGAAGATAACCATAAATGATTTATCTGAAGATGTGCTGAAAGAGGCTGCAAAGAAAACAGAAGGATTTTCTGGCCGTGAGATAGCCAAACTAATGGCCAGCGTCCAAGCTGCTGTCTATGGGCGCCCTGACTGCGCCTTGGATTCTCAGCTGTTTAAAGAACTTGTAGATTACAAGGTGGTAGAACATCATCAGCGATTAAAACTAGCAGCTGAAGGCGGCCTCCCTGCATGA 1863 0.4337 MSAAKLTSCVAVTAAAVASMTTRSDPAYSESFFRFPFFSSSPSNSPSPKDQSSDTKSESSSPEEPNNSGFNPESLEIAAEALRKINNSPYRKQETTRLAELDAEKVYYELIQSQGDIDRLRKMAEEQRNLIQEQNQRQAQVLRFEDELARKRMQTDHENQRQHNVELVKMQEDSSVRKEQARQATEEQIQSQKRQTERERAEIERETIRVKKMAEAEARAHEAKLTEDHNRRMLIDRMHGERDKWLAAINATFSHIEGGLRVLLTDRDKLIMTVGGATALAAGVYTTREGAKVTWGYINRILGQPSLIRESSMAKFPGSRIISQAKNKVLNYSTLARAEKPVGSQNGLGNVILHPSLQRRIVHLARATSNTKAHQAPFRNMLFYGPPGTGKTMVAREIARKSGLDYAMMTGGDVAPLGPQAVTKIHEIFDWAKKSKRGLLLFIDEADAFLCERNSSYMSEAQRSALNALLFRTGDQSRDIVLVLATNRPGDLDSAITDRIDEVIEFPLPGEEERFKLLQLYLNKYLCDESNDSKGGLFLKKQPQKITINDLSEDVLKEAAKKTEGFSGREIAKLMASVQAAVYGRPDCALDSQLFKELVDYKVVEHHQRLKLAAEGGLPA* 621
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g3611 620 PANTHER PUTATIVE ATP-ASE 1 617 IPR039188 GO:0005739|GO:0007005
Psa2g3611 620 CDD AAA 373 508 - -
Psa2g3611 620 ProSitePatterns AAA-protein family signature. 480 499 IPR003960 GO:0005524|GO:0016887
Psa2g3611 620 MobiDBLite consensus disorder prediction 153 202 - -
Psa2g3611 620 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 364 603 IPR027417 -
Psa2g3611 620 Pfam ATPase family associated with various cellular activities (AAA) 381 508 IPR003959 GO:0005524|GO:0016887
Psa2g3611 620 Gene3D - 332 525 IPR027417 -
Psa2g3611 620 MobiDBLite consensus disorder prediction 39 71 - -
Psa2g3611 620 Pfam ATPase family AAA domain-containing protein 3, N-terminal 51 309 IPR021911 -
Psa2g3611 620 Coils Coil 175 209 - -
Psa2g3611 620 PANTHER AAA-TYPE ATPASE FAMILY PROTEIN 1 617 - -
Psa2g3611 620 SMART AAA_5 377 510 IPR003593 -
Psa2g3611 620 Coils Coil 117 137 - -
Psa2g3611 620 MobiDBLite consensus disorder prediction 153 184 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g3611 Psa-Chr2 390479464 390484715 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g3611 379 584 Miscellaneous Gene Families AT5G53170 31.308 1.99e-14 74.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g3611 K17681 - gmx:100777755 991.875
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa2g3611 2 390479464 390484715 Psa2g3611 2 390479464 390484715 ECH