Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g3590 ATGGGAACGTTGGGCCGAGCTTTCTACGCCGTCGGATTCTGGATCCGCGAGACCGGCCAAGCCATCGATCGTCTCGGCTCTCGCCTCCAAGGCAACTACTACTTCCAAGAACAACTATCCAGGCATCGACCTTTGATGAATGTATATGATAAAGCTCCTTACGTTCATAAAGATGCATTTATTGCTCCAAGTGCTTCCATTACCGGTGATGTTCAGATTGGTCAATCTTCCTCCATTTGGTATGGATGTGTTCTCAGAGGTGATGTTAACAGCATTACTATTGGATCTTCAACTAATATACAAGACAATTCTCTTGTTCATGTTGCTAAGTCTAATTTGCCTGGAAAGGTATTACCTACTATCATTGGAGATAATGTCACTGTAGGTCACAGTGCTGTGTTACAAGGATGCATTGTTGAGGATGAGGCATTCATTGGGATGGGTGCAACCTTACTTGATGGTGTGTATGTTGAGAAACATGCCATGGTTGCTGCTGGAGCTCTTGTCAAGCAGCATACTAGGATCCCCTGTGGAGAGGTTTGGGGAGGTAATCCAGCAAGGTTCTTGAGGAAGCTTACAGAAGATGAAATGACATTCTTCTCACAATCCGCCTTAAATTATTCCAATTTGGCTCAGGCTCATGCTGCTGAAAATGCAAAACCACTGGACGAGACTGAATTTGTGAAAGTTCTTGGCAAGAAGGTTGCTCGTCCTGAAGATGGTTCAGTACTCGGCGCTGTTCAAGACACACCTCCAGAGACTAACCTCCCAAATAATGTTGTGGTAGATAAAGTTCCAAAGGCTTAA 807 0.4461 MGTLGRAFYAVGFWIRETGQAIDRLGSRLQGNYYFQEQLSRHRPLMNVYDKAPYVHKDAFIAPSASITGDVQIGQSSSIWYGCVLRGDVNSITIGSSTNIQDNSLVHVAKSNLPGKVLPTIIGDNVTVGHSAVLQGCIVEDEAFIGMGATLLDGVYVEKHAMVAAGALVKQHTRIPCGEVWGGNPARFLRKLTEDEMTFFSQSALNYSNLAQAHAAENAKPLDETEFVKVLGKKVARPEDGSVLGAVQDTPPETNLPNNVVVDKVPKA* 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g3590 268 Gene3D Hexapeptide repeat proteins 44 222 - -
Psa2g3590 268 CDD LbH_gamma_CA_like 55 212 - -
Psa2g3590 268 PANTHER YRDA, PUTATIVE-RELATED 1 268 - -
Psa2g3590 268 PANTHER DYNACTIN SUBUNIT P25 1 268 - -
Psa2g3590 268 SUPERFAMILY Trimeric LpxA-like enzymes 45 212 IPR011004 -
Psa2g3590 268 Pfam Hexapeptide repeat of succinyl-transferase 119 151 IPR001451 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g3590 Psa-Chr2 389596162 389599716 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g3590 K01726 - gmx:100794184 467.233
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa2g3590 2 389596162 389599716 Psa2g3590 2 389596162 389599716 ECH