Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g3578 ATGAGACCCCCTATGTTTGGTGGTTTCTCTTCCTCATTCACAAACATTGGTTCAGCATCATCATGGTTCGAGATATACGCTGCCTTTTCCACATTCATGATGCTCTTACGAACCGCAATCAACGATCTCATACCCTTCAAACTTCGAAACTTCATCATCTCAAAACTCTCTTCTTTCTTCACAAATTACCAACCCAACAATCAAGTCTCACTTCAAATCGACCAGTTTTGGGATGGAATGACCAACCATCTCTACTACGCAGCTAAAGAGTATCTCCCTACTAAAATATCCAACACTTACAAATCCCTCAAAGTTGGAAAAATATCCAAACACAACAACGTTCTGTTAGCCTTTGATGGTAAACAAGTAGTAACAGATGAATTTGAAGACATCAAAGTTAAATGGAAGCTTGTTGAAAACTCTAAAGAAGATGATCTTTTTGAAAATCCCAAAAGGGAATATAAGCATCATAACAAGTCGAAAGACTACGATGAAAACGGGTTTGTGTTGAGTTTTGATGAGAAGTATAGAGATAAAGTAATGAAGAAGTATATTCCACATATTTTAAGCACTTATGAAACTATAAAAGCAGGAAATAGAACTCTCAAGATTCATTCTATGCAAAATGGACCTTGGAAACAGAGTGATTTAACACATCCTGCTTCATTTGATTCAATTGCTCTGGATCCTGATCTGAAGAAAGATATAATTGATGATCTAGATAGGTTCTTGAGGAGGAAGAAACTTTATCAAAAAGTGGGTAAGCCATGGAAACGTGGGTATCTGTTGTATGGTCCACCAGGGACAGGAAAATCTAGTCTTATCGCTGCTATAGCAAAACACTTGAAATTTGATGTGTATGATTTGGATCTAAGTTCTGTGTTTTCTAACTCAGAACTCATGAGAGCCATGAGAGAGACATCTAACAGATCTATCGTCGTCTTTGAAGATATTGACTGCCACAGTGAAGTGCTTGATCGATCAAAATCAGACAAGTTTTCAGATGATGATTTTTCAGACACTTTTGGTGGTGGTAAGATGGTTAAGAACATGCCTATGCCTATGATGCCTATGCCGAGAAAGTTTACTCTTTCGGGTCTTCTTAATTATATGGATGGATTGTGGTCAAGCTGTGGAGAGGAAAGGATTTTGATATTTACTACAAATCATAAAGACAAAGTTGATTCGGCATTGTTGCGTCCTGGTAGAATGGATATGCATATTCACTTGTCATTTCTTAAAGGTAAAGCATTTAGAATCTTAGCTTCTAACTATTTGGACATTGAAGAACAACATGGTCCACTCATTGAACAAATTGAGGAGCTATTGGGAAAAGTTGATGTCACACCTGCAGTAGCAGCAGAGTATTTGTTGAGAAGTGAGGATCCTAGTGTTGCTCTTGAAGCACTTGTTAAATTTCTTCAAGAAACTGATATTTCAAAAGTTACTGTAAATGAAGAGATTTATCAGAAAGTTTAG 1479 0.3692 MRPPMFGGFSSSFTNIGSASSWFEIYAAFSTFMMLLRTAINDLIPFKLRNFIISKLSSFFTNYQPNNQVSLQIDQFWDGMTNHLYYAAKEYLPTKISNTYKSLKVGKISKHNNVLLAFDGKQVVTDEFEDIKVKWKLVENSKEDDLFENPKREYKHHNKSKDYDENGFVLSFDEKYRDKVMKKYIPHILSTYETIKAGNRTLKIHSMQNGPWKQSDLTHPASFDSIALDPDLKKDIIDDLDRFLRRKKLYQKVGKPWKRGYLLYGPPGTGKSSLIAAIAKHLKFDVYDLDLSSVFSNSELMRAMRETSNRSIVVFEDIDCHSEVLDRSKSDKFSDDDFSDTFGGGKMVKNMPMPMMPMPRKFTLSGLLNYMDGLWSSCGEERILIFTTNHKDKVDSALLRPGRMDMHIHLSFLKGKAFRILASNYLDIEEQHGPLIEQIEELLGKVDVTPAVAAEYLLRSEDPSVALEALVKFLQETDISKVTVNEEIYQKV* 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g3578 492 Gene3D - 214 408 IPR027417 -
Psa2g3578 492 PANTHER BCS1 AAA-TYPE ATPASE 15 482 - -
Psa2g3578 492 CDD AAA 246 411 - -
Psa2g3578 492 PANTHER NUCLEOSIDE TRIPHOSPHATE HYDROLASE SUPERFAMILY PROTEIN, PUTATIVE-RELATED 15 482 - -
Psa2g3578 492 Pfam ATPase family associated with various cellular activities (AAA) 262 322 IPR003959 GO:0005524|GO:0016887
Psa2g3578 492 Pfam ATPase family associated with various cellular activities (AAA) 363 410 IPR003959 GO:0005524|GO:0016887
Psa2g3578 492 Gene3D - 409 491 - -
Psa2g3578 492 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 119 462 IPR027417 -
Psa2g3578 492 Pfam Domain associated at C-terminal with AAA 44 138 IPR025753 -
Psa2g3578 492 ProSitePatterns AAA-protein family signature. 382 400 IPR003960 GO:0005524|GO:0016887
Psa2g3578 492 SMART AAA_5 257 414 IPR003593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g3578 Psa-Chr2 389292002 389293610 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g3578 206 411 Miscellaneous Gene Families AT3G02450 29.167 2.72e-10 60.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g3578 - K08900 gmx:100787726 554.288
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa2g3578 2 389292002 389293610 Psa2g3578 2 389292002 389293610 ECH