Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g3555 ATGAGTTCTCTAAATTTCTTTCTATTTTCATTCATCTTAGTTTCTTCACTCAAAATAGCAGAATCAAAAACACATTGGAAAGACATAGAGGCTCTTAAACAACTCAAACAGAACATAAACCTTAATTCAATGAATCCAGGCTCATGCGTGAGTACCTGGGACTTCACCTTCGACCCATGCGAAAATCTCTTCAGCGAGAAATTCACCTGCGGATTCAGATGCGACGTCGTCGTTTCACAGCTGAGTCGAGTCACCGAACTCGGTCTCGACCAAGCTGGTTACTCCGGTTCACTCTCTTCCATCGCTTGGGAGAATCTTCCTTATCTCGAAACTCTCGATTTCTCAAACAACTACTTCACGGGTCTCATTCCTGATTCTTTCTCAAACTTAACTCGTCTGAGTCGACTCAGTCTATCATCCAACTCGTTCACCGGAGAAATACCATCTTCCATTGGAACATCTCTTGTAAATCTCCAAGAGCTATATCTCGACAACAACAATCTCCAAGGAACAGTCCCTTCAAGCTTCAACAATCTCAAAAGCTTAACAAGGCTCGAACTTCAACGCAATAACCTCACCGGAAAAATCACTGATTTGGGCTCTTTGGTGAATCTCTACCACATGGATCTCAGTGACAATCGTTTCTCCGAAAACCCATCTTCATTCCCGGTTTCTTTAGTTCAGATTTCAATACGGAACAACAATATAAGCGGTGGTTTAGCCTCTGAAACCTTCAAGAACATGATGTATCTCCAGGTAGTTGATTTCAGCTCCAACAAAATCAACGGCTATGTTCCTTCTATATTCTTCAACCTTCCATCGTTACAACAGTTAACACTTTCATTCAACGAATTTTCCTCCATTGAAGCCCCATACGGAACACAATCACTACAAAGCGAACTCATAGCAGTTGATTTGAGTAACAATCAGCTTCAAGGCTTGTTACCTGCATTTCTAGCGTTTTTACCTAGGCTTTCTTCTCTGTCTCTGGAGAATAACCGGTTCACTGGTTTGATACCGGTTCAGTTTGCTTTAAAGACGGTTTTTCCTGAAACCGGAATGGCTCCGTTTGGGAGGCTTTTGTTAGGGGGAAATTATTTGTTGGGAGGGATACCTCGTCCTTTGTTGGTTCTTAAACAAGATTCTGCTAATGTGAGTTTAGTTGATAATTGTTTGTTTAGGTGTCCTCATGTTTTCTTTTTTTGTCAAGGTGGACAACAGAAATCATCCTCGGAATGTAGTCATGTGATTATTCCTTAG 1260 0.4135 MSSLNFFLFSFILVSSLKIAESKTHWKDIEALKQLKQNINLNSMNPGSCVSTWDFTFDPCENLFSEKFTCGFRCDVVVSQLSRVTELGLDQAGYSGSLSSIAWENLPYLETLDFSNNYFTGLIPDSFSNLTRLSRLSLSSNSFTGEIPSSIGTSLVNLQELYLDNNNLQGTVPSSFNNLKSLTRLELQRNNLTGKITDLGSLVNLYHMDLSDNRFSENPSSFPVSLVQISIRNNNISGGLASETFKNMMYLQVVDFSSNKINGYVPSIFFNLPSLQQLTLSFNEFSSIEAPYGTQSLQSELIAVDLSNNQLQGLLPAFLAFLPRLSSLSLENNRFTGLIPVQFALKTVFPETGMAPFGRLLLGGNYLLGGIPRPLLVLKQDSANVSLVDNCLFRCPHVFFFCQGGQQKSSSECSHVIIP* 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g3555 419 Pfam Leucine rich repeat 226 284 IPR001611 GO:0005515
Psa2g3555 419 Pfam Leucine rich repeat 157 215 IPR001611 GO:0005515
Psa2g3555 419 Pfam Leucine rich repeat 85 142 IPR001611 GO:0005515
Psa2g3555 419 PANTHER LEUCINE-RICH REPEAT (LRR) FAMILY PROTEIN 4 415 - -
Psa2g3555 419 Gene3D Ribonuclease Inhibitor 199 397 IPR032675 -
Psa2g3555 419 Gene3D Ribonuclease Inhibitor 26 198 IPR032675 -
Psa2g3555 419 SMART LRR_typ_2 130 154 IPR003591 -
Psa2g3555 419 SMART LRR_typ_2 322 345 IPR003591 -
Psa2g3555 419 SMART LRR_typ_2 272 296 IPR003591 -
Psa2g3555 419 SMART LRR_typ_2 106 129 IPR003591 -
Psa2g3555 419 SMART LRR_typ_2 155 178 IPR003591 -
Psa2g3555 419 SMART LRR_typ_2 202 225 IPR003591 -
Psa2g3555 419 PANTHER LEUCINE-RICH REPEAT (LRR) FAMILY PROTEIN 4 415 - -
Psa2g3555 419 SUPERFAMILY L domain-like 76 344 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g3555 23 362 Receptor kinase-like Gene Family AT5G01950 30.836 4.27e-30 121
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g3555 - - gmx:100811366 530.406
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa2g3555 2 387538510 387540795 Psa2g3555 2 387538510 387540795 ECH