Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g3540 ATGAGGATGTGGTCGTGTTTATCGGTGTTTCTGTTATTCTTGTTCTATCCGGCGGCGGCAACACCTTCTTCACAACTACATCGCTTCTCTGAATCTGCAAGTAGAATTGGAAACAACAACAATTATCTGACCAAGGAAGAGCTCTGGTTTTCTCAGACCCTCGACCACTACTCTCCCTATGATCATCGCAAATTTCAGCAGCGTTACTATCAGTTCCTTGACTTTTTTAGGATTCCAGATGGACCTGTTTTTTTGGTCATATGTGGTGAATATTCTTGCGATGGGATAAAAAATGACTACATTAGTGTTCTGGCAAACAAGTTTGGAGCAGCTGTGGTTTCTCTTGAGCATCGCTATTACGGCAAGAGTTCGCCATTTAGAACTCTGGCAACAGAAAATTTGAGATATCTTTCATCCAAGCAAGCACTTTTTGATTTGGCTGTTTTTCGACAGAGTTATCAGGAATCATTAAATGCGAGGCTTAATAGAACAAAAACCGATAATCCATGGTTTGTTTTCGGCGTCTCGTATCCTGGAGCACTCAGTGCATGGTTCCGTCTTAAGTTTCCCCATTTAACATGTGGAAGTATTGCAAGTTCTGCAGTTGTTCTTGCTGTTTACAACTTCCCAGAATTTGATCAGCAGATTGGTGAGTCAGCAGGCGTTGAATGTAAGGCAGTGTTACAAGAAACCACTCGACTTATCGAACAAAAACTAGCAACTAATGGAAAGGCACTGAAGGCTTCTTTTAATGCAGCTAATCTTGAAAATGATGGAGACTTCTTGTATTTCATGGCTGATGCTGCTGTTACAGCGTTTCAATATGGAAATCCGGATATATTATGCAAGCCTCTTGTTGAAGCAAAGAAGCACGGAGATGATTTGGTGGAAGCTTATGCCAAATTTATCAAAGATTTTTTCCTTAAATCTGAAGGTAGTACACAAAGTTATAACCAACAGAACTTGAAGAACACTGCTATCACTGAAAACAGTGCTGATAGACTATGGTGGTTTCAAGTTTGTACTGAAGTTGCATACTTTCAGGTGGCTCCTTCAAATGACAGTATACGCTCCCACAAAGTTGACACGAGATACCATTTGGACCTTTGCAAAAATGTCTTTGGAAAGGGCATATATCCTGATGTTGATGCAACTAATTTATACTATGGAGGCACAAAAATTGCTGGTTCCAAAATAGTATTCACAAATGGTTCACAAGATCCTTGGCGTCGTGCATCTAAACAAATTTCATCACCCGATATGCCTTCCTACACCATCACTTGTCATAATTGTGGCCATGGAACAGACATGCGAGGTTGCCCTCAAAGTCCCTTTAATATTGAAGGCAATGACAAGAACTGCACATCACCTGATGCTGTTCACAAAGTCAGGCAAAAGATCATAGAGCATATGGATTTATGGCTGTCTCAGTGCCAGGATATGAGCAGGAGTTGTATATGA 1461 0.4073 MRMWSCLSVFLLFLFYPAAATPSSQLHRFSESASRIGNNNNYLTKEELWFSQTLDHYSPYDHRKFQQRYYQFLDFFRIPDGPVFLVICGEYSCDGIKNDYISVLANKFGAAVVSLEHRYYGKSSPFRTLATENLRYLSSKQALFDLAVFRQSYQESLNARLNRTKTDNPWFVFGVSYPGALSAWFRLKFPHLTCGSIASSAVVLAVYNFPEFDQQIGESAGVECKAVLQETTRLIEQKLATNGKALKASFNAANLENDGDFLYFMADAAVTAFQYGNPDILCKPLVEAKKHGDDLVEAYAKFIKDFFLKSEGSTQSYNQQNLKNTAITENSADRLWWFQVCTEVAYFQVAPSNDSIRSHKVDTRYHLDLCKNVFGKGIYPDVDATNLYYGGTKIAGSKIVFTNGSQDPWRRASKQISSPDMPSYTITCHNCGHGTDMRGCPQSPFNIEGNDKNCTSPDAVHKVRQKIIEHMDLWLSQCQDMSRSCI* 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g3540 486 Pfam Serine carboxypeptidase S28 52 440 IPR008758 GO:0006508|GO:0008236
Psa2g3540 486 PANTHER PROTEASE S28 PRO-X CARBOXYPEPTIDASE-RELATED 15 481 - -
Psa2g3540 486 SUPERFAMILY alpha/beta-Hydrolases 53 211 IPR029058 -
Psa2g3540 486 Gene3D alpha/beta hydrolase 43 272 IPR029058 -
Psa2g3540 486 Gene3D alpha/beta hydrolase 298 479 IPR029058 -
Psa2g3540 486 PANTHER OS10G0511600 PROTEIN 15 481 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g3540 Psa-Chr2 386682745 386686126 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g3540 - - mesc:110601726 770
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa2g3540 2 386682745 386686126 Psa2g3540 2 386682745 386686126 ECH