Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g3524 ATGGATCGTCGAGGTTGGCCGTGGAAGAAAAAATCATCTGATAAAGTCACAAAGACTGATAAACCATTTGTCACAACTGACTCCGTTGGTTCTACCTTATCTTCTGTGGCACATTTAGGAAATCAGCATGAAAAAAATTGCGCAAATAAGAACTATGTTCAAATTCCAATGGATTCTTACACATGTATGACTGAATTGGAAGATCAAGTAAAAGATTTGGAATCAAAGCTATCAGCAGCTTATTCAGAGTTAGATAACAAGGAAAATCTGGTTAAACAGCATGCGAAAGTTGCCGAGGAAGCAGTTTCAGGTTGGGAGAAAGCCGATGCAGAAGTTGTTTCCTTACGAAGTCAACTTGAATCTATTACTCTTTCGAAGCTTAGTTGTGATGAGAGAGTAACTCATTTAGAGGGAGCTCTGAAAGAATGTGTGAAGGAGATAAGAACTATAAAGGAAGAAAGTGAGAAGAAAGTACAAGAGGTGATTCTTGTGAAATCTCAACAGTGGGAGAGGTTCAAGTTAGAGCTTGAATCAGAAATAGATAAGTTGGATAAAGGACTTCACGAAGAAGCTGGTGAGAATGCCGCACTTCTGAGATCGCTTCATGAAAGTTCAAACAAAATAGTGAAACTAAAAGAAGAAAAGTCTGAAGCGGAGGCCGAGTTAGAGGTTCAAAAGAAGAATGTTCAGTCGTGCGAAAAAGAAATAAGTTCTTTGAAGTATGAGCTGCATATTGTTTCTAAGGAGATGGATATTCGAAATGACGAGAAGAACATGATAATGAAATCGGCAGACGTGGCTAACAAACGGCACGTGGAGGATGTTAAGACTATTGCTAAGTTGGAGGGTGAGTGCCAACGCCTTCGTGGTTTGCTGCGAAAGAAGTTACCTGGACCTGCTGCATTGGCACAAATGAAGCTAGAAGTTGAAAGTACGCACCGCGTCATTAGTGGAATTCATCAAAGAAAAACTAGTAACCTGCAAGAATCCGAGTTTCTTAGTGTGTCGAAACGATTTGAGGTGTTTGAAGAAGAAACAACGAGATTGAAAGAAGCTTTGGCGTCAAGTAATGCTGAACTACAGGCTTCTAGGAACTTGTACACTAAAACAGTTGGTAGAGTTAAGAGCTTAGAAGCTGAGGTACAAATTCTTCATCAAGAAAGAAGTTCGCAGACGCAGAAATCAAATTTAGAGATCAATTACCGGAATTCTTCAAGTAGAATTTCTAGCAATTCACCAAGCATCACTTCTATATCAGATAGTTGGCATGATGATCCAGAAAGTCCTGCTGACTCATTTTCAGCCTCAGCTTCTGACCATTTTAACGTAAGTCGAGTTAGAACCTCGGTTAAAGTTGAGAATCGCAAAAGTGAAACTATCTCGGAACTGATGAACGATTTCCTCGAAGTGGAGAAAATGGCCTGTTCTTCAGACAATGACAGTGTACAGATTGCTAACAAAGTAAAGAACGACTCATCTGAAGATGATCAAGTAAAATCAAATGATGCTTTGGTTGAGATTCAGCTGAAATGTATGACAGAATCATATAAGTCACTTCAAACACATGTTGAAGAGTTAGAAGCTGAAAATAAGCTTCTAAAGGAAAAGATAGACGAGCTAAAGAACGATCTCGAGGAGGAAAAACAATGCCATCATAATGCTTTGGCGAGGCACAGAGAATTAGACGAAAAAACGCCAAGGGATAAGCGCCTCGAGTGTACATCAAATTCGGCAGCGAATAAAGACATTGATACTCGGAAGGATACAGAACTAGCTGCTGCAGAGAAAAAGCTAGCAGAATGTCAAGAGACTCTACACGTACTTGGTAGGCAATTACAAGCAATGTGTCCACAAATCGGCTCTAAAAGACTTCAAACAAATGAATCGTCGATTAAACCAAATTATGACCAGTCGAATTCCAATGGCTCTTATAACTCAGATGAAACTGATCACGCCGAAGCATGTAGTGTATCTTCTAATTCTGATATTCAAGGAGCGAATGACGAGTTTTCATCGTCTCGTAACTTTGGTTCCACGTCATGTCTTTCAGACACAGAATGCAACCTTTCTGTAAATTCTTCAATAGTATCAAAGGCACCTCACCGATGA 2109 0.3973 MDRRGWPWKKKSSDKVTKTDKPFVTTDSVGSTLSSVAHLGNQHEKNCANKNYVQIPMDSYTCMTELEDQVKDLESKLSAAYSELDNKENLVKQHAKVAEEAVSGWEKADAEVVSLRSQLESITLSKLSCDERVTHLEGALKECVKEIRTIKEESEKKVQEVILVKSQQWERFKLELESEIDKLDKGLHEEAGENAALLRSLHESSNKIVKLKEEKSEAEAELEVQKKNVQSCEKEISSLKYELHIVSKEMDIRNDEKNMIMKSADVANKRHVEDVKTIAKLEGECQRLRGLLRKKLPGPAALAQMKLEVESTHRVISGIHQRKTSNLQESEFLSVSKRFEVFEEETTRLKEALASSNAELQASRNLYTKTVGRVKSLEAEVQILHQERSSQTQKSNLEINYRNSSSRISSNSPSITSISDSWHDDPESPADSFSASASDHFNVSRVRTSVKVENRKSETISELMNDFLEVEKMACSSDNDSVQIANKVKNDSSEDDQVKSNDALVEIQLKCMTESYKSLQTHVEELEAENKLLKEKIDELKNDLEEEKQCHHNALARHRELDEKTPRDKRLECTSNSAANKDIDTRKDTELAAAEKKLAECQETLHVLGRQLQAMCPQIGSKRLQTNESSIKPNYDQSNSNGSYNSDETDHAEACSVSSNSDIQGANDEFSSSRNFGSTSCLSDTECNLSVNSSIVSKAPHR* 703
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g3524 702 MobiDBLite consensus disorder prediction 386 423 - -
Psa2g3524 702 PANTHER FILAMENT-PLANT-LIKE PROTEIN 503 693 - -
Psa2g3524 702 PANTHER FILAMENT-PLANT-LIKE PROTEIN 1 497 - -
Psa2g3524 702 SUPERFAMILY Tropomyosin 64 255 - -
Psa2g3524 702 MobiDBLite consensus disorder prediction 624 660 - -
Psa2g3524 702 Pfam Filament-like plant protein, long coiled-coil 498 618 IPR008587 -
Psa2g3524 702 Pfam Filament-like plant protein, long coiled-coil 87 497 IPR008587 -
Psa2g3524 702 MobiDBLite consensus disorder prediction 386 436 - -
Psa2g3524 702 PANTHER FILAMENT-LIKE PLANT PROTEIN 4 1 497 - -
Psa2g3524 702 PANTHER FILAMENT-LIKE PLANT PROTEIN 4 503 693 - -
Psa2g3524 702 Coils Coil 374 394 - -
Psa2g3524 702 Coils Coil 591 611 - -
Psa2g3524 702 Coils Coil 63 90 - -
Psa2g3524 702 Coils Coil 194 242 - -
Psa2g3524 702 Coils Coil 509 561 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g3524 Psa-Chr2 385840853 385844264 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g3524 - - gmx:100803281 728.783
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa2g3524 2 385840853 385844264 Psa2g3524 2 385840853 385844264 ECH