Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g3514 ATGTCTCAATCTCAAACATTACCACTCAAGAGACAACAAAGTGAAAACCCCTCAGATGATGGTTCCACTGCTATCAAACCTTCTCGCCTCAAAATTTCATTACCCTCTGAAGATAGCGACAAAAAGAATCTCAACAAGAGAGTTAAAGATGTTGAAATTTGTGTCCCTATAGTTTATGGGACTGTTGCATTTTATTTGGGTAGGAAGGCTAGTGAGGCTCAATCTCATAGATGGACTGTTTATGTACGTGGAGCTTCTAATGAAGATCTTAGTGCAGTGGTTAAGAGGGTTGTGTTTCAGTTGCATCCTAGTTTCAATAATCCTACAAGAGTTGTTGAATCACCCCCTTTTGAAGTAACAGAATGTGGTTGGGGTGAATTTGAAATAGCTATCACCCTCTTTTTCCACAGTGATGCTTGTGAAAAACAGTTGGATTTGTATCATCATTTGAAATTATATCCTGAAGATGAGTCTGGTCCGCAGACTACGAAGAAACCCGTTGTCATTGAATCTTATAACGAGGTTGTTTTTCCTGAACCTTTGGAGGGTTTTCTTGCACGCATTCAGAATCATCCTGCCGCTGTTGTTCCTAGGCTACCGCCTGGTTTGAATTTACCAAACCCGGTACCAAATGATCATATGAATGACAAGCAAAGAGGTGACACCAAAGATCATCCACTGGGCCAGTGGTTTTTGAACTTCTCGGAGGCTGATGAGCTCTTAAAACTAGCTGCAGCCCGCCAACAGGTCCAAGCTCACATTGTTAAGCTACGAAGGCAACTGAATTTGTTGGAAGGACAGTCGAAACAGCCTTCTGGTTACGAATGTACATGA 834 0.4185 MSQSQTLPLKRQQSENPSDDGSTAIKPSRLKISLPSEDSDKKNLNKRVKDVEICVPIVYGTVAFYLGRKASEAQSHRWTVYVRGASNEDLSAVVKRVVFQLHPSFNNPTRVVESPPFEVTECGWGEFEIAITLFFHSDACEKQLDLYHHLKLYPEDESGPQTTKKPVVIESYNEVVFPEPLEGFLARIQNHPAAVVPRLPPGLNLPNPVPNDHMNDKQRGDTKDHPLGQWFLNFSEADELLKLAAARQQVQAHIVKLRRQLNLLEGQSKQPSGYECT* 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g3514 277 Gene3D YEATS domain 48 200 IPR038704 -
Psa2g3514 277 PANTHER YEATS DOMAIN 25 270 IPR005033 GO:0006355
Psa2g3514 277 PANTHER TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 14B 25 270 - -
Psa2g3514 277 MobiDBLite consensus disorder prediction 1 37 - -
Psa2g3514 277 Coils Coil 247 267 - -
Psa2g3514 277 CDD YEATS_TFIID14_like 53 184 - -
Psa2g3514 277 Pfam YEATS family 75 154 IPR005033 GO:0006355
Psa2g3514 277 MobiDBLite consensus disorder prediction 1 23 - -
Psa2g3514 277 ProSiteProfiles YEATS domain profile. 47 191 IPR005033 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g3514 Psa-Chr2 385263974 385266142 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g3514 K11341 - gmx:100799891 469.544
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa2g3514 2 385263974 385266142 Psa2g3514 2 385263974 385266142 ECH