Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g3497 ATGGCTGCTGCAGTAACAGCCGCAGTCTCCTTGCCATACTCCAACTCCACTTCCCTTCCGATCAGAACATCTATTGTTGCACCAGAGAGACTTGTCTTCAAAAAGGTTTCATTGAACAATGTTTCTATAAGTGGAAGGGTAGGTACCATCAGAGCTCAGGTTACTACTGAGGCACCTGCTAAGGTAGTAAAGCATTCAAAGAAACAAGATGAAAATATTGTTGTGAACAAGTTCAAACCTAAGGAACCATACGTTGGGAGGTGTCTTCTCAACACAAAGATCACTGGTGATGACGCACCTGGTGAAACTTGGCACATGGTTTTCAGCACTGAGGGAGAGGTTCCTTACAGAGAAGGACAATCTATTGGGATAGTTCCGGACGGAATTGACAAGAATGGCAAGCCTCACAAGCTGAGATTGTATTCAATTGCTAGCAGTGCCATTGGTGATTTTGGAGACTCCAAAACTGTTTCCCTATGTGTGAAACGTCTTGTGTACACAAACGATGCCGGAGAAGTTGTTAAGGGAGTTTGCTCAAATTTCTTGTGCGATTTGAAGCCGGGATCAGAAGTAAAGATTACTGGACCAGTTGGTAAAGAAATGCTTATGCCAAAAGATCCTAATGCTACTGTCATCATGTTGGGAACTGGAACTGGAATCGCCCCATTTCGCTCATTTTTATGGAAAATGTTTTTTGAGAAGCATGAAGATTACCAGGTAGGGGAAGAGTTTGGAAAGAAAGAAAATCACTATCGAGTGATCGATGTTACCAGAAAAGTTTAG 783 0.4266 MAAAVTAAVSLPYSNSTSLPIRTSIVAPERLVFKKVSLNNVSISGRVGTIRAQVTTEAPAKVVKHSKKQDENIVVNKFKPKEPYVGRCLLNTKITGDDAPGETWHMVFSTEGEVPYREGQSIGIVPDGIDKNGKPHKLRLYSIASSAIGDFGDSKTVSLCVKRLVYTNDAGEVVKGVCSNFLCDLKPGSEVKITGPVGKEMLMPKDPNATVIMLGTGTGIAPFRSFLWKMFFEKHEDYQVGEEFGKKENHYRVIDVTRKV* 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g3497 260 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 116 126 IPR001709 GO:0016491
Psa2g3497 260 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 139 146 IPR001709 GO:0016491
Psa2g3497 260 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 176 185 IPR001709 GO:0016491
Psa2g3497 260 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 212 231 IPR001709 GO:0016491
Psa2g3497 260 PIRSF Frd-NADP+_RD 1 244 IPR015701 GO:0016491
Psa2g3497 260 Gene3D Translation factors 51 197 - -
Psa2g3497 260 Gene3D - 198 246 IPR039261 -
Psa2g3497 260 PANTHER FERREDOXIN--NADP REDUCTASE, LEAF ISOZYME 1, CHLOROPLASTIC 1 239 - -
Psa2g3497 260 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 81 203 IPR017927 GO:0016491
Psa2g3497 260 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 201 247 IPR039261 -
Psa2g3497 260 PANTHER - 1 239 IPR015701 GO:0016491
Psa2g3497 260 Pfam Oxidoreductase NAD-binding domain 213 237 IPR001433 GO:0016491
Psa2g3497 260 SUPERFAMILY Riboflavin synthase domain-like 58 204 IPR017938 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g3497 Psa-Chr2 384297602 384300510 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g3497 K02641 - gmx:100798467 429.483
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa2g3497 2 384297602 384300510 Psa2g3497 2 384297602 384300510 ECH