Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g3478 ATGGGTTGTTGCTATTCAAGACTAGAGAGGGAAGAAACTGTGACGCATTGCAAATCAAGGAAACGTTACATGAAAAACCTGGTACAAGCAAGACATGCTTTTTCAGCTGCGCATGTTATGTACATTCGATCTCTTCGTTCAACTGGTTCAGCTTTGTTTCACTTTGCTAACGCTGAAAAAACCACTCATGTTAATCACCATCTTCCACCTGAGCCACAGCCAATTCTTCCACCTCCGCCGCCGCGTGCTCCGTCGTCAATGCCTCCTCCTCCTCCACCGCCGATGAGTCCGAGTTTGAGTTCTTATACTTGGACTTCCGGGACGGGTTCGTCTCCTCTTCCTCCGCCTCCGCCGCCGCCTCCTCCTCCCCCGGTGATGTCCTCCGGTTGGGATTTCTGGGATCCATTCATGCAGCAGCAGCAGCAGCAGCCTCCGCCTCCTTCGTCGAGGTCGGCTACCGAGGAAGAGTGGGAAGCTACGACAACTACTGGCTCTGAGGTGGTTGTGATGGCTGGTGGGGCTGCGGCGAGTATGGCGACTCCGTCGTCTGGTGTGGTGGGGTTTTCTAAGGAAACGCCTAGTGAGCTTGCAATGGTGGTTTCTAGAAACAGTAAAGATCTGGTTGAAGTTATCAAAGAGCTTGATGATTACTTTCTCAAAGCTGCTGATGCTGGCTCTCATGTTTCATTTCTGTTACAAGTTCCAACTTCTGGTTTTTCTGATTATAGTAAAGCAAGTAAAATGTACGGAAATGGATGGAGTTTGAGTCCATCAATGTGGGCTTGGGGTTCTTCCAGTCCTAAATTGAATGGATTTGGCAAGCTGACTCAGGAGGTTTCTGTTGGTAGTTTTAGGGCTAATAATGGTGTTGGAAATGGTGGACATTCCTCTACTGTTGAGAGGCTATATGCATGGGAGAAGAAATTGTACCAAGAGGTCAAGAATGCTAAATTAATAAAGATGGAGCATGAGAAGAAGGTGGCAATGGTAAGGAAGTTAGAGATGAGAAGTGCGGACTATTTGAGGACAGAAAAGGCGAAGAAAGAAGTGGAGAAATTAGAATCACAAATAATGGTTTCTTCGCAAGCCATTGATAGTACATCGGCCGAAATCGTCAAATTAAGGGAGATAGAGCTTTACCCTCAACTCATTGAGCTTGTCAAAGGGTTGATGTGCATGTGGAGAAGCATGTATGAGTGTCATCAAGTCCAGATGCATATAGTCCAGCAACTGGAATACCTTAATACCATCCCGTCAAATAACCCGACGTCTGAAATTCATAGGCAATCAACGCTTCAATTGGAGCTTGAGGTACAACAATGGCACCAGTCCTTTTGCAACCTCTTTAAAGCTCACCGGGATTATATTGAATCCCTCTCGGGTTGGCTAAGGCTCAGCCTTTACCAGTTTAGCCGAAACCCTCTTAGCAGAACATCTGAGGAGTCAAAGATATACACTCTCTGCGAACAATGGCACCTTGCTGTTGAGCATATACCTGACAAGGTAGCGTCCGAAGGAATAAAAAGCTTGTTGACCGTTATTCACGCGATTGTAGTTCAACAGACGGAGGAACATAAGCAAAAGAAGAAGTCGGACTACGCGTTCAAAGAGTTTGAGAAGAAGGTGGTTCAGCTTAGATCCTTGGAGTGCAAGTACGGTCCTTACTCCATGTCGGAACGGTCTGGTTCTGTGAGAAGAACGAAGGACCCTGTCGTGGAGAAGCGAGCTAAGGTGGAAGCTATGAGAGCGAAGGCTGAAGAAGAGAAAACAAAGCATGAAAAGGCTGTGAGTGTGACAAGGGCAATGACACTGAATAACTTGCAAATGGGTTGTCCTCAAGTTTTTCAAGGGATTGTAGGGTTTTCAAGTGTGTGCATGGAGGCTTTTGAGTCTGTATACAACAAAGCTAAAGTTGCCGAACAAGAGCGCGACGTGAAGAGAATATTACCATAG 1953 0.4644 MGCCYSRLEREETVTHCKSRKRYMKNLVQARHAFSAAHVMYIRSLRSTGSALFHFANAEKTTHVNHHLPPEPQPILPPPPPRAPSSMPPPPPPPMSPSLSSYTWTSGTGSSPLPPPPPPPPPPPVMSSGWDFWDPFMQQQQQQPPPPSSRSATEEEWEATTTTGSEVVVMAGGAAASMATPSSGVVGFSKETPSELAMVVSRNSKDLVEVIKELDDYFLKAADAGSHVSFLLQVPTSGFSDYSKASKMYGNGWSLSPSMWAWGSSSPKLNGFGKLTQEVSVGSFRANNGVGNGGHSSTVERLYAWEKKLYQEVKNAKLIKMEHEKKVAMVRKLEMRSADYLRTEKAKKEVEKLESQIMVSSQAIDSTSAEIVKLREIELYPQLIELVKGLMCMWRSMYECHQVQMHIVQQLEYLNTIPSNNPTSEIHRQSTLQLELEVQQWHQSFCNLFKAHRDYIESLSGWLRLSLYQFSRNPLSRTSEESKIYTLCEQWHLAVEHIPDKVASEGIKSLLTVIHAIVVQQTEEHKQKKKSDYAFKEFEKKVVQLRSLECKYGPYSMSERSGSVRRTKDPVVEKRAKVEAMRAKAEEEKTKHEKAVSVTRAMTLNNLQMGCPQVFQGIVGFSSVCMEAFESVYNKAKVAEQERDVKRILP* 651
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g3478 650 PANTHER UNCHARACTERIZED 1 635 - -
Psa2g3478 650 Pfam Protein of unknown function (DUF630) 1 59 IPR006868 -
Psa2g3478 650 SUPERFAMILY Formin homology 2 domain (FH2 domain) 114 124 - -
Psa2g3478 650 PANTHER SERINE HYDROXYMETHYLTRANSFERASE, PUTATIVE (DUF632)-RELATED 1 635 - -
Psa2g3478 650 Coils Coil 343 363 - -
Psa2g3478 650 Pfam Protein of unknown function (DUF632) 207 515 IPR006867 -
Psa2g3478 650 MobiDBLite consensus disorder prediction 138 164 - -
Psa2g3478 650 MobiDBLite consensus disorder prediction 80 120 - -
Psa2g3478 650 MobiDBLite consensus disorder prediction 80 98 - -
Psa2g3478 650 Coils Coil 571 595 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g3478 Psa-Chr2 383427821 383432953 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g3478 1 59 Acyl Lipid Metabolism Gene Families AT2G27090 37.288 5.04e-08 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g3478 - - aprc:113869576 942.569
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa2g3478 2 383427821 383432953 Psa2g3478 2 383427821 383432953 ECH