Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g3474 ATGGCTTCCACATCCACCCAATTATCTCTATCCCCATCCCTCAAACAACCAATTCACCTCTCCTCTCTTCAAAATCCTAACTTTCTTCACCCCCACTCCTTATTCTCCCACCCCACCAACCATTTCCCAAAAATTTCATCTCTTTCTACACCTCTTAGGTCACCTATATGCGCTAATTCATCTCAACTCATGGACCCCTTTTCAGCAAAAACCCAACCCGGAACTCCCACCACTGTCAACGTTGATTTGGGTGATCGGAGCTACCCCATTTATATCGGATCCGGTTTGCTCAATAAACCCGAGCTTCTCCAGAGGCATGTCCATGGAAAGAAGGTCCTTATTGTCACTAACACTACAGTTGCACCTTTGTATCTAGACAAGGTTGTTGAGGCTTTAACAAGTGGAAACCCAAATGTTTCTGTTGAAAGTGTCATTTTACCTGATGGTGAGCAGTACAAGGACATGGATACTCTTATGAAAGTGTTTGACAAGGCCATTGAGTCTCGATTGGACCGGCGGTGTACTTTTGTTGCTCTTGGAGGTGGTGTGATTGGTGACATGTGTGGCTTTGCTGCCGCTGCGTTCCTAAGGGGTGTTAATTTTATTCAGATTCCAACCACTGTTATGGCACAGGTTGATTCTTCAGTTGGTGGCAAAACTGGGATAAATCATCCCCTTGGGAAGAATCTGATCGGTGCTTTTTACCAACCTCAATGTGTGCTTATAGACACGGACACATTAAATACATTACCAGAGAGGGAACTAGCATCAGGATTTGCAGAGGTTATAAAGTATGGGCTCATTAGGGATGCAGAATTTTTTGAGTGGCAAGAGAAAAATATGCAGGCTTTGATGGCTAGAGATCCTAATGCCCTGGCATATGCTATAAAGCGGTCGTGTGAAAACAAGGCAGAGGTTGTGTCCTTGGATGAGAGAGAAGGTGGAATCAGAGCAACATTGAACTTGGGTCATACATTTGGCCATGCAATAGAAACTAGCGTTGGCTATGGGAAGTGGCTTCATGGAGAGGCCGTTGCTGCTGGCACGGTAATGGCTGTTGACATGTCATATCGCCTAGGATGGATTGATGATTCTATTGTGAAGCGAGTCAATGACATTTTGAAACAGGCTAAGTTACCTATTGTGCCTCCCGAAATTGTGACTGTGGACATGTTTAAATCTGTAATGGCGGTTGATAAGAAGGTAGCAGATGGACTGCTGAGACTTATCCTTCTAAAGGGTTCTCTAGGAAGTTGCGTTTTCACAGGGGATTATGACAGGAAGGCTCTAGATGACACACTTCATGCGTTCTGTAAATCTTGA 1323 0.4452 MASTSTQLSLSPSLKQPIHLSSLQNPNFLHPHSLFSHPTNHFPKISSLSTPLRSPICANSSQLMDPFSAKTQPGTPTTVNVDLGDRSYPIYIGSGLLNKPELLQRHVHGKKVLIVTNTTVAPLYLDKVVEALTSGNPNVSVESVILPDGEQYKDMDTLMKVFDKAIESRLDRRCTFVALGGGVIGDMCGFAAAAFLRGVNFIQIPTTVMAQVDSSVGGKTGINHPLGKNLIGAFYQPQCVLIDTDTLNTLPERELASGFAEVIKYGLIRDAEFFEWQEKNMQALMARDPNALAYAIKRSCENKAEVVSLDEREGGIRATLNLGHTFGHAIETSVGYGKWLHGEAVAAGTVMAVDMSYRLGWIDDSIVKRVNDILKQAKLPIVPPEIVTVDMFKSVMAVDKKVADGLLRLILLKGSLGSCVFTGDYDRKALDDTLHAFCKS* 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g3474 440 Gene3D - 250 440 - -
Psa2g3474 440 SUPERFAMILY Dehydroquinate synthase-like 78 430 - -
Psa2g3474 440 Pfam 3-dehydroquinate synthase 144 402 IPR030960 -
Psa2g3474 440 PANTHER 3-DEHYDROQUINATE SYNTHASE 76 436 - -
Psa2g3474 440 Gene3D - 64 249 - -
Psa2g3474 440 PANTHER 3-DEHYDROQUINATE SYNTHASE, CHLOROPLASTIC 76 436 - -
Psa2g3474 440 CDD DHQS 87 434 - -
Psa2g3474 440 Hamap 3-dehydroquinate synthase [aroB]. 76 438 IPR016037 GO:0003856|GO:0005737|GO:0009073
Psa2g3474 440 TIGRFAM aroB: 3-dehydroquinate synthase 88 429 IPR016037 GO:0003856|GO:0005737|GO:0009073
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g3474 K01735 - gmx:100806628 697.582
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa2g3474 2 383330558 383334688 Psa2g3474 2 383330558 383334688 ECH