Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g3473 ATGATGTTGACTAAGAGCAGATTAGGCCTTTTGGTAACCACTTTTGTTGCAGTGTTGTTAACTCTTTCAGAAGTTGTCCATTGTGTAGAAAAGGGTGTGACTTATGATGATAGGTCACTCATCATCAATGGTCAAAGGATGCTTCTTTTCTCTGGATCGGTTCATTATCCGCGTAGTCCTCCTGAGATGTGGCCAGACATTTTGAAGAAAGCCAAACAAGGAGGGCTCAATGTGATTCAAACTTATGTTTTTTGGAACATTCATGAACCTGTGCAAGGCCAATTCAATTTTGAAGGAAATTATGATTTAATAAAATTTATTAAGATGATTGGGAATCATGGTCTGTATGTAACACTTAGAGTTGGACCATTCATTGAAGCAGAATGGAATTATGGAGGATTACCAATATGGCTAAGAGAAGTTCCAAACATTGTATTCAGATCAGATAATCCATCTTTCATGAACCATATGCAAAGATTCACCCAAATGATCATAAAGAAGATGAGGGATGAGCGGCTTTTTTCATCTCAAGGAGGTCCAATTATTCTGTCACAGATTGAAAATGAATACACATCTGTTCAACAGGCATACAAAGAAAACGGCACTCGGTATATTCAATGGGCAGGAAACATGGCTATAGGACTAGATACTGGAGTTCCATGGATCATGTGCAAGCAACTGAATGCACCAGAACCAGTGATAAATACTTGCAATGGAAGGTACTGTGGAGATACTTTTACTGGCCCTAATACTCCAAATAAACCTACTTTATGGACTGAGAATTGGACAGCACAATACCGAACATTTGGAGACCCGCCATCTATAAGATCAGCCGAGGACATTGCATTTGCCGTTACTCGTTTCTTCTCAAAGAAAGGCACGCTTACTAACTATTACATGTATTATGGTGGAACAAATTTTGGAAGAACATCATCTTCTTTTGTGACAACTCAGTACTATGATGAAGCTCCTATTGACGAATATGGACTGCCAAGGGATCCGAAATATGGTCACCTTAGAGACTTGCATTCTGCTTTAAAACTTTGCCAGAAAGATTTACTATGGGGAACTCCATCACTGCAAAAGTTGGGTAAAGATTTAGAGGGTATAACTTTTGAAGGGAAAGGAGGTGTTGAATGTGCTGCTTTCTTATCCAACAACGACACCAGTTTGGCAGCAACTGTGGAATTCAGAGGGGCTAAGTATCTCATTCCTCCACGTTCTATAAGCATACTTCCTGACTGCAAAACAGTTGTATACAATACAAAAATGATTGTTTCACAATTCAGTGAAAGGAACTACAAAAAATCAATGTTTGCTAATAAACTTCAATGGACAATGTTTAAAGAGATGATTCCTACTCCTGATGCTTCTCAAATTAAAACAATGGAGCCTTCAGAGCACTTCAGCACAACCAAGGATAACAGTGACTATCTCTGGTTTATGACAGGTATAAAAGTGGATCAAGATGACTTACCCTTGAATAAAACTATAAGTCCGATTCTCGAAGTCGCGTCTCTCGGTCATCTTTTGCATGCATTTGTCAATGGTGAATATATAGGATCTGCAAATGGAAACAACATAGCAAAGAGTTTTAACTTCAAAAAAGAAATATCCTTGAAGCTAGGAGATAATTTCATATCAATCTTGGGTGCAACTGTTGGATTCCCTGATAGTGGATCTTACTTGGAACACAGGCTCGCCGGGGTCCGTGCAGTGCGGCTGCTTGGCCTTAACAGTGGTACCCGTGAACTGACATACAACGGATGGTGGCATAAGGTAGGTTTAGATGGTGAAAAACTCAACATTTTCACAGAGCAAGATTCCCACAAGTTTGAATGGGCCAAAGTTAACAAGGGACCATCTCCTGCTTTAACATGGTACAAGACCAACTTTGATGCTCCAGAAGGAAATAATCCTGTTGCCATTCAAATGGAAACTATGTCCAAAGGAATGGTTTGGGTGAATGGGAAAAGTATTGGCCGATACTGGTCATCTTTCCTTTCTCCTCTAGGAAAGCCTTCTCAGCCAGTGTATCACATTCCAAGGGCGTTCTTGCAGCCGAAGAAGAATCTTCTGGTTTTATTGGAAGAAATGGGAGGGAACATAGATGGTATACAGATCCTAACTGTTAATAGAGATACAATTTGCAGCACAATAGGGGAAGATTATCCTCCAAATGTAGGGACATGGAGCAGAGAAAATGGTGTGATAAAGAGCATTGTGGAAACTCCAAAACCAACAGCACACTTGGTGTGTTCGGACAACAAAACAATTACTGAAGTGAATTTTGCAAGTTATGGTGATCCAACGGGAAGCTGTGGACATTTCCTTCTTGGAAAATGCAACGCACCAAATAGCCAAAACATTGTGGAACAGTACTGTTTGGGAAAGACAGAGTGTACAGTGCCTGTAGACAAGAATATTTTTGATAAGGATGGAAACACTTGTCCTGGAATTCCAAAGACTCTATCCATTCAAGTGCACTGTGGTCATAAGAATGTGAGATCACATATGAGAGTCATGTTAGAGTCTAACCTGTGA 2544 0.3998 MMLTKSRLGLLVTTFVAVLLTLSEVVHCVEKGVTYDDRSLIINGQRMLLFSGSVHYPRSPPEMWPDILKKAKQGGLNVIQTYVFWNIHEPVQGQFNFEGNYDLIKFIKMIGNHGLYVTLRVGPFIEAEWNYGGLPIWLREVPNIVFRSDNPSFMNHMQRFTQMIIKKMRDERLFSSQGGPIILSQIENEYTSVQQAYKENGTRYIQWAGNMAIGLDTGVPWIMCKQLNAPEPVINTCNGRYCGDTFTGPNTPNKPTLWTENWTAQYRTFGDPPSIRSAEDIAFAVTRFFSKKGTLTNYYMYYGGTNFGRTSSSFVTTQYYDEAPIDEYGLPRDPKYGHLRDLHSALKLCQKDLLWGTPSLQKLGKDLEGITFEGKGGVECAAFLSNNDTSLAATVEFRGAKYLIPPRSISILPDCKTVVYNTKMIVSQFSERNYKKSMFANKLQWTMFKEMIPTPDASQIKTMEPSEHFSTTKDNSDYLWFMTGIKVDQDDLPLNKTISPILEVASLGHLLHAFVNGEYIGSANGNNIAKSFNFKKEISLKLGDNFISILGATVGFPDSGSYLEHRLAGVRAVRLLGLNSGTRELTYNGWWHKVGLDGEKLNIFTEQDSHKFEWAKVNKGPSPALTWYKTNFDAPEGNNPVAIQMETMSKGMVWVNGKSIGRYWSSFLSPLGKPSQPVYHIPRAFLQPKKNLLVLLEEMGGNIDGIQILTVNRDTICSTIGEDYPPNVGTWSRENGVIKSIVETPKPTAHLVCSDNKTITEVNFASYGDPTGSCGHFLLGKCNAPNSQNIVEQYCLGKTECTVPVDKNIFDKDGNTCPGIPKTLSIQVHCGHKNVRSHMRVMLESNL* 848
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g3473 847 SUPERFAMILY Galactose-binding domain-like 409 579 IPR008979 -
Psa2g3473 847 Pfam Galactose binding lectin domain 751 830 IPR000922 GO:0030246
Psa2g3473 847 Gene3D Glycosidases 29 349 - -
Psa2g3473 847 SUPERFAMILY Galactose-binding domain-like 587 736 IPR008979 -
Psa2g3473 847 Pfam Glycosyl hydrolases family 35 39 345 IPR031330 -
Psa2g3473 847 PANTHER BETA-GALACTOSIDASE RELATED 16 827 IPR001944 GO:0004553|GO:0005975
Psa2g3473 847 PANTHER BETA-GALACTOSIDASE 14 16 827 - -
Psa2g3473 847 Gene3D - 739 839 IPR043159 -
Psa2g3473 847 Gene3D - 591 719 - -
Psa2g3473 847 Pfam Beta-sandwich domain in beta galactosidase 353 424 IPR041392 -
Psa2g3473 847 PRINTS Glycosyl hydrolase family 35 signature 43 60 IPR001944 GO:0004553|GO:0005975
Psa2g3473 847 PRINTS Glycosyl hydrolase family 35 signature 64 82 IPR001944 GO:0004553|GO:0005975
Psa2g3473 847 PRINTS Glycosyl hydrolase family 35 signature 119 138 IPR001944 GO:0004553|GO:0005975
Psa2g3473 847 PRINTS Glycosyl hydrolase family 35 signature 176 191 IPR001944 GO:0004553|GO:0005975
Psa2g3473 847 PRINTS Glycosyl hydrolase family 35 signature 257 272 IPR001944 GO:0004553|GO:0005975
Psa2g3473 847 PRINTS Glycosyl hydrolase family 35 signature 294 309 IPR001944 GO:0004553|GO:0005975
Psa2g3473 847 PRINTS Glycosyl hydrolase family 35 signature 313 329 IPR001944 GO:0004553|GO:0005975
Psa2g3473 847 PRINTS Glycosyl hydrolase family 35 signature 623 637 IPR001944 GO:0004553|GO:0005975
Psa2g3473 847 PRINTS Glycosyl hydrolase family 35 signature 650 666 IPR001944 GO:0004553|GO:0005975
Psa2g3473 847 ProSitePatterns Glycosyl hydrolases family 35 putative active site. 178 190 IPR019801 GO:0004553|GO:0005975
Psa2g3473 847 ProSiteProfiles SUEL-type lectin domain profile. 743 831 IPR000922 GO:0030246
Psa2g3473 847 SUPERFAMILY (Trans)glycosidases 33 350 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g3473 Psa-Chr2 383325421 383330578 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g3473 31 831 Glycoside Hydrolase AT4G35010 56.894 0.0 991
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g3473 - - zju:107405613 1161.75
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa2g3473 2 383325421 383330578 Psa2g3473 2 383325421 383330578 ECH