Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g3369 ATGGGAAAGATTGGCATCCACATCCCTTGTATCAAGGTTACCGGAGTTCATCTCTTCATCTTCTTTAGAATATTATTCGGTACTCTTCTCAGTAAAGGTGTTAAAGGGTTCATCGCCCCTTTCTACAGAACCCTCGTCAGACTCAAAATTATCGTTAAACATGACAAGATTGGGGTTGGTGGAAATTCATCAGATGGATTAAAATCTAGAGATGTAGATCCACGGCTGATATTCCATCATGGTGTACCATCAGGTGCTACAAACTTTACCTATCACAATATTCACAACATATTTGCTCTTTCCACCAATGATGGGAGGATTAAATTATTTGGTAAAGATAATGCTCAAGTCCTACTTGAATCAAATAAGCCAGTGTCTACCAAATTCTTACAGTTCATCCAGAATCAAGGCATACTTATAAATGTCACTTCAAATAACCATATTGAGGTTTGGGACATAGACAAGAAATTGTTGTGTGATTTGTACATTGTTAAAGAAGAAATCACTTCTTTTGCAATCATTCAGCACAGCCTCTACATGTACATTGGAGTTTCTAGTGGTAATGTTTCAGTTTTGAAGCTTGATCAAAATTGGCATGTGGTAAAGATGAACTACTCCATACCCCTTTCAGCTTCTATTGGAAATTCAAATGAAGTATTCGATGACATCGCTGTGACGCACATATTGCCTCAACCAGCAGCTGAAAGTAAAAGAGTTCTCGTAATCTTTAGAAACGGCCAAATAATACTATGGGATATTCAAGAGAGCAGATGCATTTTCAGAACTGGCGGAAACGTGTCGCAGTCACTGCATAATGAAACAAAGAAAGTGTCATGTGCGTGTTGGGTGTGTCCTTATGGAAGCAAAGTGGTTGTAGGGTACAACAATGGAGATCTCTTCATTTGGAGCATTCCTTCTCTAACCACAGGAAATGGCTCAGCTTCTGGTTTTAGCAGCAAAAACACTCCTATGTTCAAATTCAACTTGGGATATAAATCAGATAAAACTTGTATAGAATCAGTAAAATGGATATATACCAAAGGAAAGTCTAGTAGATTATATGTCATGGGAGCTTCTAACTCGATGCAGGTAGTGTTGTTGAATGAACATACCGAAACTCGCACGACTAAGTTAGGACTTAATTTGTCCGAATGCTGCGTTAACATGGAGATTATATCATCCTCAAATGAGCAAAGCAAGCACAAACAAAGTTCTTTGATTTTGCTTGGGAAATCAGGACATGTATATCTCTATGATGATAGTTTGATTGAAAGGTATCTATTGCAATGGCAATCAAAGTCCACTCCCTCACTACCAAAGGAAGTTATGGTGAGGTTACCACTTTCTGATTCAAGCATCACCATAGCTAAATTCATCTCCAACGCTACCAATGTGTTCTATTCTGAAGACGAGTATTACAGTCAGATGCTGAGAAATTATCCACAGCTTTTTTCCATTGAAACAAATCACAGAGATGGGATTAACCTGAGTTCTGCCAACTTCTCTGGATTTTCAAACATTAAAAACTTGTACATAACTGGACACAAAAATGGAGCTATAACTTTTTGGGATGCATCATGTCCCTTGTTCATTCCAGTTTTGCAATTAAACCAGCAGAGCGAAAACGATCATTCATTAAGTGGTGTACCCTTGACAGAATTATATTTTGACATCGACTCTCTTCTCCTTATTTCTGGTGATCAGAGCGGACTGGTTCGTATATTCAGATTCAAACCTGAACCCTACACCTCCAACGGCTTCATGTCCCTTACAGGAAATACAAAAAAAGGGTTTGATCATGTAGTCAAGAGTATGAAACATGTAAAAACTATTGGTGCTGTAATTTGTATGACTATAGATCATAGCTCAAGGCATCTTGCTGTTGGTTCTGATCAAGGAAATGTTTCGGTTATTAACATGGATGGTCCATCTCTGTTGTTTCAGAAACATATTTCAAGCGAAATTTCTACTGGTATCATCTCTCTGCAGTTCATAGCCTGCAGGTTGTACGGTTTCGAGAAAAACATCTTAGCAGTCGGAACAAAGGACTCGTCAGTTTTTGCACTGGATAGCGAAACTGGAAACATGATGAGCACTGGATCTGTTCATCCTAAGAAGCCATCTAAAGCTCTATTTATGAAGGTGTTAGATGGACAGTGCGAACCAATTACAAGATCAATTAGAAAAGATAGCTTTGATTTGAGAGAAGGGGATCATATTGAGGATGCAACAACAAAGAAAATGTTGCTGTGTTCTGAGAAGGCTTTATATATCTATTCGTTCGAGCATGCTCTACAGGGAATTAAAAAGGTGGTTTACAAAAAGAAGTTCTCTTCTTCCTGCTGTTGGGCATCGACTTTTTACGGCGCCTCTGATATTGGTCTCGTAATACTTTTCCCCACTGGAAAAATAGAATTAAGGTCTTTACCAGACTTATCTTTGATAGTGAAGATTTCAATTAGAGGCTTCACTTATTCACCTCCGAAGTTTAGGTCGTTTTCTGACAAACAGATATGTTGTTCATCCAGGGGAGACATTGTTCTGGTGAATGGTGACCAGGAAATTTTTGTTGTCTCGTTGTTGGTCCAAAGGAATATTTTCAGGCTTTTGGACTCTGTTGGCTGCATCGGGAAGGAAAGGATGGTATCACAAAAGGAGCTTGTTCCTAACCTAGGCATACATAAGGAAAACAAGGGCATATTCAACTCGATTATCAAAGATTTTACTGGCGGCAAAGAAAAGTATATGCCCTTCATGGAAAAAGAAGATCCTAAAGAAAGTCTCCAGGAACTCTCTGTAATATTTTCACATGCAAATTTTCCGCTGGAAGCCAACAATAGTGTGGATGAAAATAAGCTAGAATCAAGCTTAGATGACATGGATCTTGAGAACCATAGAGAAATACGCAAAGAACAAAGCATATTAGGAGCTCTTAATAAGAAGAAATTGGCTGGCAAATTTCAGGCTTTGAAAGGAAAAGTGAGAGAGATGAAGGGCGACAACCAAAAAGCATCAGATAAGGAAGAGCAACCAGATAAGAAAATTGGTGCAGTCAGTCAAATTAAGAAAAAATATGGATTTTCTTCTTCGTCCAATGAAACAAGCGTCGCTAAATCTGCAGAGAGCAAGCTCCAGGAAAACACAAGGAAATTACAGGGTATTGAGCTACGTACTGCAGAGATACAAAATAAGGCAAAATCATTTTTATCGATGGCAAAACAGGTGCTGCGAAACGCTGAACAGGATAAACAAAGTTGA 3258 0.3858 MGKIGIHIPCIKVTGVHLFIFFRILFGTLLSKGVKGFIAPFYRTLVRLKIIVKHDKIGVGGNSSDGLKSRDVDPRLIFHHGVPSGATNFTYHNIHNIFALSTNDGRIKLFGKDNAQVLLESNKPVSTKFLQFIQNQGILINVTSNNHIEVWDIDKKLLCDLYIVKEEITSFAIIQHSLYMYIGVSSGNVSVLKLDQNWHVVKMNYSIPLSASIGNSNEVFDDIAVTHILPQPAAESKRVLVIFRNGQIILWDIQESRCIFRTGGNVSQSLHNETKKVSCACWVCPYGSKVVVGYNNGDLFIWSIPSLTTGNGSASGFSSKNTPMFKFNLGYKSDKTCIESVKWIYTKGKSSRLYVMGASNSMQVVLLNEHTETRTTKLGLNLSECCVNMEIISSSNEQSKHKQSSLILLGKSGHVYLYDDSLIERYLLQWQSKSTPSLPKEVMVRLPLSDSSITIAKFISNATNVFYSEDEYYSQMLRNYPQLFSIETNHRDGINLSSANFSGFSNIKNLYITGHKNGAITFWDASCPLFIPVLQLNQQSENDHSLSGVPLTELYFDIDSLLLISGDQSGLVRIFRFKPEPYTSNGFMSLTGNTKKGFDHVVKSMKHVKTIGAVICMTIDHSSRHLAVGSDQGNVSVINMDGPSLLFQKHISSEISTGIISLQFIACRLYGFEKNILAVGTKDSSVFALDSETGNMMSTGSVHPKKPSKALFMKVLDGQCEPITRSIRKDSFDLREGDHIEDATTKKMLLCSEKALYIYSFEHALQGIKKVVYKKKFSSSCCWASTFYGASDIGLVILFPTGKIELRSLPDLSLIVKISIRGFTYSPPKFRSFSDKQICCSSRGDIVLVNGDQEIFVVSLLVQRNIFRLLDSVGCIGKERMVSQKELVPNLGIHKENKGIFNSIIKDFTGGKEKYMPFMEKEDPKESLQELSVIFSHANFPLEANNSVDENKLESSLDDMDLENHREIRKEQSILGALNKKKLAGKFQALKGKVREMKGDNQKASDKEEQPDKKIGAVSQIKKKYGFSSSSNETSVAKSAESKLQENTRKLQGIELRTAEIQNKAKSFLSMAKQVLRNAEQDKQS* 1086
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g3369 1085 SMART WD40_4 479 524 IPR001680 GO:0005515
Psa2g3369 1085 SMART WD40_4 604 639 IPR001680 GO:0005515
Psa2g3369 1085 SMART WD40_4 539 576 IPR001680 GO:0005515
Psa2g3369 1085 SMART WD40_4 263 303 IPR001680 GO:0005515
Psa2g3369 1085 SMART WD40_4 154 193 IPR001680 GO:0005515
Psa2g3369 1085 SMART WD40_4 71 111 IPR001680 GO:0005515
Psa2g3369 1085 Gene3D - 82 421 IPR015943 GO:0005515
Psa2g3369 1085 Gene3D - 477 717 IPR015943 GO:0005515
Psa2g3369 1085 PANTHER TRANSDUCIN/WD40 REPEAT PROTEIN 52 1084 - -
Psa2g3369 1085 MobiDBLite consensus disorder prediction 1023 1042 - -
Psa2g3369 1085 MobiDBLite consensus disorder prediction 995 1019 - -
Psa2g3369 1085 Pfam Lethal giant larvae(Lgl) like, C-terminal 766 865 IPR013905 -
Psa2g3369 1085 MobiDBLite consensus disorder prediction 995 1048 - -
Psa2g3369 1085 SUPERFAMILY WD40 repeat-like 611 847 IPR036322 GO:0005515
Psa2g3369 1085 SUPERFAMILY WD40 repeat-like 130 647 IPR036322 GO:0005515
Psa2g3369 1085 Coils Coil 1037 1057 - -
Psa2g3369 1085 PANTHER LETHAL 2 GIANT LARVAE PROTEIN 52 1084 - -
Psa2g3369 1085 CDD R-SNARE_STXBP5_6 1019 1077 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g3369 Psa-Chr2 378586560 378594214 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g3369 - - cam:101494027 1661.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa2g3369 2 378586560 378594214 Psa2g3369 2 378586560 378594214 ECH