Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g3364 ATGGCGACCATTAGGCCATTACCGGAATCTGTTCGTAGCTCAATTCGTTCCGGCATTTCGTTGTTTGATTTCACAAGAATCGTCGAGGAACTGGTTTTCAATAGCCTCGATGCTCGTGCTACAAAGGTATCGGTGTTTGTTAATATTGGGAGCTGCTTCTTAAAAGTAGTTGATGACGGAGATGGAATTACTCGAGATGGACTGGAATTGGTGGGAGAAAGATATGCAACATCAAAATTTCTTAATTTGGCTGACCTAAATACCACAAGTGAAAACTTTGGTTTTCGTGGTGAAGCTTTAGCTTCCATTTCCGAAGTCTCTTTGTTGGAAATAGTGACAAGAGCTTATGGAAGGCCAAATGGTTATAGAAAAGTATTGAAGGGGTGCAAGTGTTTATACCTTGGTATTGATGATGATAGAAAGGAAGTAGGCACAACAGTCATTGTCTGTGAAATATTTTACAACCAACCAGTTCGGAGGAAGCACATTGAATCAAGCCCCAATAAGGTACTCCAATCAATCAAGCAATGTGTAATGCGGCTTGCACTCGTGTGCCCAAATATTTCCTTCAAAGTTGTTGATATTGAAAGAGAGGATGAGCTTTTCTGCTCACATTCTGCTGCTTCTCCACTGTCACTTGTAACCGCTGGCTTTGGGGTGGAGGTCACAAACTCTCTTCATGAATTAGAAGTTGAAAACAATATCATAAAGCTTACTGGATACATATCAGATCCTTGCAATACCATTGATATGAAGGCCTTACAGTATCTCTATATCAACTCACAGTTCGTTTGCAAGGGACCCATTCATAAGCTTTTAAGTCAACTGGCTATTAGATTTGAGCATCGTAACTCGTGGAGTGCTGATAGTGAATGCAAAAACAAAAAGAGAGACAGATCGCAGCCATGTCCGGCATATATCTTGAATTTAAGGTGCCCCCGCTCTTTATATGTTTTGAGCTTTGAGCCATCAAAAACTTATGTTGAATTCAAGGATTGGACTCCAATACTAAACTTCATTGAAAAGGTCATCAGACATTTCTGGGAGGGAAGCATAGCTTATGGCGATTCCACCAATAAAGCCACTTATACTGTTCAAAAAGATCAACGGAAAAAAGTAGATCAAGATGTCAACACCATTTCAGTGGAATCAGATGTATCAAAATTTGGCAACCAAAATCGTAAGGGTTGTTTAGACCTCTTCTTTTCCACTTCAGACAAGCTAACTGAAGATGACAATCATCAATGCAACAGGGAGGATGTTAAAACCAATGTTGGTTACTTACATCGAAGAACTGAGATGTTCAAAGACAAACATAACACGGGAGGGCTTCATTGTCGGACCGGTTATTCTGGAAATTTACTGGACGTTTCATACGCCAAAAGCATGCCCACCACTAAGAAAAAGAACAACAATTTTTCGACGTATGATGACAATGATTTATTACAAGGAGTTTATTTTTCAGATGGTATGCGTCCTACTGTAGAAAATTTATATGATAACATACCTTTTTATGCAACAAGTTCTTCACATGGAAGATTATTAAATAAAGCAGATGCTAGTGTGCTATGTGAATCATTTGAAGGTGATTTTCAAAAGCCTTTTCTAAAGAGCTGCTCTACACAAAAAGGAAGTATTCTGCATGAGAAGGCTTTGCTCGTAAATAATGAACCTGAACTCCAAACTTTTAGCTTTTGGAGCAAGAAAAATCTATGGGGGGATTGTTTCATTGGTAAGGATTTAAATGCCCTTCCCTGTGTAGAAATTGCAAAAAAATTGAAGATGTCTGAAGATTCTAATTTTCTTTTAAGAGCACAGTCTGAAGAAAATTGTCGACCTTCAGATTCATGGTATTCAGCAACACAAATAGGAAACTCTAGTTCTGATGATCAGTTACCAAACTCTGAAAGGCATCCTGTTTATCAAGGTCCCTCACCTAAGGCTACTGCATTGGATGTTTATCATACCGATAATACTAATGATCTTAAAAGAGCATCTAGATACCGTGAAAGGACTCACCATACACAAAATTTTCATGAGGAAGAATTTGGGAACAACTTCAGTTACAATCTTGAGGGAGCGTCTAAATACTGCAAAAGGAACCATCGTACACGTGTTTTTGATGATGAAGAAAAAGGGTACAACTTCAGTTATGATATGTCAAGGCATGCTAACTGGCTACCCTGCACCTCAAATTTTGCACATAGTGGATTTAGTTTTGATCGTGCTGTTGATTTTAATGAAATTTTCAACCGATTGGTTGACTGGCCTGATTTCGGTGATTCATATTTCCCAAAAAGGTCGGGTATTGTAAATATGGAAACCAACTTACTATCACCTGAGTCATATGTTGGAAACTGTACGAAACCCAACATTAACAAAGGCAAAAGGGATCATTTTAAGCATCCAGCTTTGGAAAAGACTCATGCAAGATCTAAAAGAAGCTTCTCAGCTCCACCATTTCATAGAAGTAAAAGGAGGTTTTTCTCTCTAAATCAGCTTCCAGAAACGGTACCTAAAAGATCTACCGGCCAAGCATCCCACTCTACTGCCAATCTTCTAGAAGCCAGTGATTTAAAATATTCTCAACATCCTTCTGGTGCTTTTCACCCCAGCAATGAAGATCTATTGCAAGAATTTAAAACTAATGTGAAACGGAGTTCAGAGGTTCTTGGGGCTCCACAGGTTGATGACATTGGTAAGACTGATGGTTTTGAAAGTTTCAATGTTCAACAGAATGATCCATTCAGAGAATTGATATCTAGGGAAGTGCAAGATCCCATAGATCACAGGACCAAATGGAGGAGCTGCTCACCCCAAACTCCAAAGAACGATAAACTAATTGATATTGGAAATCAAAACAATATACTTGATATCTCTTCTGGATTCTTGCATCTTGCCGGAAATTCACTAATACCTGAAACTATCGGTAAGAAATGCCTCAAGGATGCCAAAGTTCTCCATCAGGTCGATAAGAAATTCATTCCAATCATGGCTGGCAGAACCCTTGCCGTTATTGATCAGCATGCTGCAGACGAAAGAATCAGACTGGAAGACTTCCGTCAAAAGGTATTATCTGGAGAAGCAAAAGCATTAACCTATCTAGACGCTGAACAGGAGCTGGTGCTGCCAGAGATGGGTTATCAATTACTTAATAGTTATGGTGAACAGATAAAAGATTGGGGCTGGATCTGTAAGAGTCATACTCAAAATTCTGAATCCTTTAGAAGGAATTTGGATATTCTCAACAGACAACAAATGACCATCACCCTTGTTGCGGTACCGTCTATTTTTGGTGTCAATTTAAATGATGTTGATCTATTAGAGTTTCTTCAGCAGCTTGCTGATACTGATGGATCATCAACAATGCCACCGTCCGTTGTACGACTCCTAAATTCTAAAGCATGCAGAGGTGCAATTATGTTTGGGGATTCATTGCTACCATTGGAATGTTCCCTTCTAGTTGAAGAGCTAAAGCATACATCACTCTGTTTCCAGTGTGCTCATGGACGACCAACCACTGTTCCTCTAGTCAACTTGGAGGCACTGCATAATCAAATTACCAAGCTTGGACTGATGAATGAGGGCTCAAGTAATAATAAGTGGCATGGTTTACAAAGACATAAAGTGTGTTTAGAACGTGCAGTACTCCGTTTAAATTCTGCTAAGAGTTGA 3675 0.3921 MATIRPLPESVRSSIRSGISLFDFTRIVEELVFNSLDARATKVSVFVNIGSCFLKVVDDGDGITRDGLELVGERYATSKFLNLADLNTTSENFGFRGEALASISEVSLLEIVTRAYGRPNGYRKVLKGCKCLYLGIDDDRKEVGTTVIVCEIFYNQPVRRKHIESSPNKVLQSIKQCVMRLALVCPNISFKVVDIEREDELFCSHSAASPLSLVTAGFGVEVTNSLHELEVENNIIKLTGYISDPCNTIDMKALQYLYINSQFVCKGPIHKLLSQLAIRFEHRNSWSADSECKNKKRDRSQPCPAYILNLRCPRSLYVLSFEPSKTYVEFKDWTPILNFIEKVIRHFWEGSIAYGDSTNKATYTVQKDQRKKVDQDVNTISVESDVSKFGNQNRKGCLDLFFSTSDKLTEDDNHQCNREDVKTNVGYLHRRTEMFKDKHNTGGLHCRTGYSGNLLDVSYAKSMPTTKKKNNNFSTYDDNDLLQGVYFSDGMRPTVENLYDNIPFYATSSSHGRLLNKADASVLCESFEGDFQKPFLKSCSTQKGSILHEKALLVNNEPELQTFSFWSKKNLWGDCFIGKDLNALPCVEIAKKLKMSEDSNFLLRAQSEENCRPSDSWYSATQIGNSSSDDQLPNSERHPVYQGPSPKATALDVYHTDNTNDLKRASRYRERTHHTQNFHEEEFGNNFSYNLEGASKYCKRNHRTRVFDDEEKGYNFSYDMSRHANWLPCTSNFAHSGFSFDRAVDFNEIFNRLVDWPDFGDSYFPKRSGIVNMETNLLSPESYVGNCTKPNINKGKRDHFKHPALEKTHARSKRSFSAPPFHRSKRRFFSLNQLPETVPKRSTGQASHSTANLLEASDLKYSQHPSGAFHPSNEDLLQEFKTNVKRSSEVLGAPQVDDIGKTDGFESFNVQQNDPFRELISREVQDPIDHRTKWRSCSPQTPKNDKLIDIGNQNNILDISSGFLHLAGNSLIPETIGKKCLKDAKVLHQVDKKFIPIMAGRTLAVIDQHAADERIRLEDFRQKVLSGEAKALTYLDAEQELVLPEMGYQLLNSYGEQIKDWGWICKSHTQNSESFRRNLDILNRQQMTITLVAVPSIFGVNLNDVDLLEFLQQLADTDGSSTMPPSVVRLLNSKACRGAIMFGDSLLPLECSLLVEELKHTSLCFQCAHGRPTTVPLVNLEALHNQITKLGLMNEGSSNNKWHGLQRHKVCLERAVLRLNSAKS* 1225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g3364 1224 PANTHER DNA MISMATCH REPAIR PROTEIN MLH3-RELATED 1 1182 IPR028830 GO:0006298
Psa2g3364 1224 SMART MutL_C_2 986 1146 IPR014790 GO:0005524|GO:0006298
Psa2g3364 1224 Gene3D - 989 1177 IPR042120 -
Psa2g3364 1224 MobiDBLite consensus disorder prediction 625 654 - -
Psa2g3364 1224 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 27 118 - -
Psa2g3364 1224 SMART DNA_mis_repair_2 214 349 IPR013507 GO:0005524|GO:0006298|GO:0030983
Psa2g3364 1224 Gene3D - 215 352 IPR014721 -
Psa2g3364 1224 Gene3D - 1030 1141 IPR042121 -
Psa2g3364 1224 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 23 201 IPR036890 -
Psa2g3364 1224 Pfam MutL C terminal dimerisation domain 985 1146 IPR014790 GO:0005524|GO:0006298
Psa2g3364 1224 Pfam DNA mismatch repair protein, C-terminal domain 217 346 IPR013507 GO:0005524|GO:0006298|GO:0030983
Psa2g3364 1224 SUPERFAMILY DNA mismatch repair protein MutL 984 1177 IPR037198 -
Psa2g3364 1224 ProSitePatterns DNA mismatch repair proteins mutL / hexB / PMS1 signature. 94 100 IPR014762 -
Psa2g3364 1224 SUPERFAMILY Ribosomal protein S5 domain 2-like 200 349 IPR020568 -
Psa2g3364 1224 Gene3D - 2 207 IPR036890 -
Psa2g3364 1224 PANTHER DNA MISMATCH REPAIR PROTEIN MLH, PMS, MUTL 1 1182 IPR038973 GO:0006298|GO:0016887|GO:0032300|GO:0140664
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g3364 K08739 - gmx:100788019 1589.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa2g3364 2 378479937 378491024 Psa2g3364 2 378479937 378491024 ECH