LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Psa2g3357	ATGGAGGTTGTCATCATTGCTCTTGCTGCTACACTCGGGAATCTTCTTATTGGATGGGATAGTTCAACCATTGCAGGGGGTATGACCTACATCAAACAGGAATTTGATTTGGAAAAGGATCCAACACTTGAAGGCTTCATCGTCTCCATGTCTTTTATAACTGGAACTCTTGTCACCATATTTTCTGGAACAATATCTGATTTGATTGGGAGAAGGCCTATGTTGATAACTTCCTCTGTTATGTTTATCATTGCTGGTTTCGTAATGTTCTGGGCTCCTAATGTTACTGTTATTCTCGTGTCGAGGATGATCCAAGGCGTTGCTATTGCTCTTGCTGTTACTTTTAATCCACTTTACATTTCTGAGATTGCGCCTGCTGATATAAGAGGACAATTGAACACTCTTACTCAGTTCGCTTGTTCTAGTGGAATGTTTTTGGCTTATATTCTTGTTTTCTCAATGTCCTTGTTGCCGTCGCCTAGTTGGAGACTTATGCTTAGTGTTATTTCTATTCCTTCTGTGCTTTATTTTTTCTTGACTGTGTTTTATCTCCCTGAATCTCCTCGATGGCTTGTAAGCAAAGGTCGAATCCTTGAGGCTGAGAAAGTTCTGAAAAGACTTCGCCGCGTGGATGATGTCTCAGGGGAGCTGGCTTTGCTCGCGGAGGGTCTCAGGCCTGGGGGTGAAGACATTTCCATTGAAGAATATGTAGTTGCTCCAGCTAGTGAGATCCTAATCAACCAAGAAGCAGGAAAAGATTATATAAAATTATATGGACCTAATGAGGGAGTTACAATGATTGCTCAACCTGTGAGTGGGCAAGGTAGCATGCTATCGCGCAGTATGTTGTCTCAGCACGGAAGCTATGCATCGCGCAGTATGTTGTCTCAGCAAGGAAGCTTTTCATCTCAAGCAGCTGCTAATCTCAAAGATCCTATTGTCAACCTATTTGGAAGTTTGCATGAGAGTACTCTCATCGAGAGCGGACGTTCAAATAGCATGTTGATTAACAATGCTAATAGTATATTTAGCACGGGAGATCCAGAGCCTAGCCCGTTTGGTACCAGTGACAACCTGCGTACCCCATTGAATCCATTTCATGGGGGTGCTGATAGGGCTCATGGATCTAAGGACATGTTAGCTATGAGAAGCAATAGCAGTTTGGTTCATGCAAATGATGTTGAAACACCGAGAAATACAGACATCGGTGGAGGTTGGCAATTGGTTTACAAATCAACTGATGATGCAATGGCTGGGAAAAAAGAAGGGCTCCAAAGGGTTTATTTGCATGCAGATCCTTCAGCTGCTGCAGTGTCTCAGTCTTCTCATGCTTCATTTGTTTCAACTTCTGGCTATGACATACATACAGATGGTGGTGAAGCTTTTCAGGCTGCTGGTATAGTCAGTCGGTCAGTTCTTGGAACTAGTGATGCATTGCAACTGCCAGAAGTAGCTGCAAAAGGTCCAAAGTGGAGAGCTCTTCTAGAACCAGGCGTCAAGCGTGCGTTAGTTGTTGGAATAGGACTTCAAATTCTTCAACAGGCTGCAGGCATAAATGGATTTCTATACTATGCTCCTCAGATTCTTGAGCAGGCAGGAGTAGGAGCTCTTCTATCAAATTTAGGCATCAGTTCAATATCTGCTTCTTTTCTCGTAAATATCATTACAACATTTTGCATGCTTCCGTGTATAGCTATTTCCATAAGGCTCATGGATGTTGCTGGCAGACGGTCAATCATGCTGTACACAATACCGGTTTTGATAGTATGTCTCCTAGTACTAGTACTGAGACAGTTTTTTCAACTCAGCTCTGTCCTAGATGCATCAATTTCAGCTATCAGCGTTGTGGTCTATGAAAGCTTCTTCTGCATGGGTCTTGGTATTATTCCCAACATCATATGTGCAGAAATCTTCCCGACCAGTGTTCGCGGAATCTGCATTTCCCTTACTTCTCTTACATATTGGGTTTGTACATTGGCCGTCACGTTGACATTCCCTTATTTGCTCCAACTTCTCGGTCTCAGCGGCGTCTTCGCTTTATTTGTTGGTGGCTGCATCATTTCATGGATATTTGTTTACTTAAAAGTTCCTGAAACAAAGGGTATGCCTTTGGAAGTTATTATTGAGTTTTTTGCAATTGGTGCAAAGCCTGGTACTGATCCTGCAGAATTTGGAATGAAAGATTAA	2187	0.4262	MEVVIIALAATLGNLLIGWDSSTIAGGMTYIKQEFDLEKDPTLEGFIVSMSFITGTLVTIFSGTISDLIGRRPMLITSSVMFIIAGFVMFWAPNVTVILVSRMIQGVAIALAVTFNPLYISEIAPADIRGQLNTLTQFACSSGMFLAYILVFSMSLLPSPSWRLMLSVISIPSVLYFFLTVFYLPESPRWLVSKGRILEAEKVLKRLRRVDDVSGELALLAEGLRPGGEDISIEEYVVAPASEILINQEAGKDYIKLYGPNEGVTMIAQPVSGQGSMLSRSMLSQHGSYASRSMLSQQGSFSSQAAANLKDPIVNLFGSLHESTLIESGRSNSMLINNANSIFSTGDPEPSPFGTSDNLRTPLNPFHGGADRAHGSKDMLAMRSNSSLVHANDVETPRNTDIGGGWQLVYKSTDDAMAGKKEGLQRVYLHADPSAAAVSQSSHASFVSTSGYDIHTDGGEAFQAAGIVSRSVLGTSDALQLPEVAAKGPKWRALLEPGVKRALVVGIGLQILQQAAGINGFLYYAPQILEQAGVGALLSNLGISSISASFLVNIITTFCMLPCIAISIRLMDVAGRRSIMLYTIPVLIVCLLVLVLRQFFQLSSVLDASISAISVVVYESFFCMGLGIIPNIICAEIFPTSVRGICISLTSLTYWVCTLAVTLTFPYLLQLLGLSGVFALFVGGCIISWIFVYLKVPETKGMPLEVIIEFFAIGAKPGTDPAEFGMKD*	729

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Psa2g3357	728	ProSiteProfiles	Major facilitator superfamily (MFS) profile.	6	700	IPR020846	GO:0022857
	Psa2g3357	728	Gene3D	MFS general substrate transporter like domains	2	256	IPR036259	-
	Psa2g3357	728	Gene3D	MFS general substrate transporter like domains	474	713	IPR036259	-
	Psa2g3357	728	SUPERFAMILY	MFS general substrate transporter	6	705	IPR036259	-
	Psa2g3357	728	PANTHER	-	1	724	-	-
	Psa2g3357	728	Pfam	Sugar (and other) transporter	7	220	IPR005828	GO:0016021\|GO:0022857\|GO:0055085
	Psa2g3357	728	Pfam	Sugar (and other) transporter	490	708	IPR005828	GO:0016021\|GO:0022857\|GO:0055085
	Psa2g3357	728	PRINTS	Sugar transporter signature	14	24	IPR003663	GO:0016020\|GO:0022857\|GO:0055085
	Psa2g3357	728	PRINTS	Sugar transporter signature	99	118	IPR003663	GO:0016020\|GO:0022857\|GO:0055085
	Psa2g3357	728	PRINTS	Sugar transporter signature	513	523	IPR003663	GO:0016020\|GO:0022857\|GO:0055085
	Psa2g3357	728	PRINTS	Sugar transporter signature	612	633	IPR003663	GO:0016020\|GO:0022857\|GO:0055085
	Psa2g3357	728	PRINTS	Sugar transporter signature	635	647	IPR003663	GO:0016020\|GO:0022857\|GO:0055085
	Psa2g3357	728	ProSitePatterns	Sugar transport proteins signature 1.	567	583	IPR005829	GO:0016021\|GO:0022857\|GO:0055085
	Psa2g3357	728	ProSitePatterns	Sugar transport proteins signature 1.	62	79	IPR005829	GO:0016021\|GO:0022857\|GO:0055085
	Psa2g3357	728	PANTHER	MAJOR FACILITATOR, SUGAR TRANSPORTER, MAJOR FACILITATOR SUPERFAMILY-RELATED	1	724	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Psa2g3357	Psa-Chr2	378238720	378242191	Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Psa2g3357	50	724	Organic Solute Cotransporters	AT3G51490	50.782	0.0	637

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Psa2g3357	-		-	gmx:100788445	1095.88

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Psa2g3357	2	378238720	378242191	Psa2g3357	2	378238720	378242191	ECH