Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g3349 ATGAAATTTAGATTTTGCGATTACAACCATTGGAGCAATCTCTATAACAAAGCGCGAAACCTAATTTCCACTCAACGCTCTTCTTCCGCCACTTTCGCCGCCATGACTGACCTCAACATCCTCAAAACCAAGCTCTGCATCATCGGAAGTGGCCCCTCCGCCCACACTGCCGCAGTATACGCGGCCCGTGCGGAGCTCAAACCAGTCCTCTTCGAGGGATGGATGGCCAACGACATCGCTCCTGGTGGTCAACTCACCACCACCACCGACGTAGAGAATTTCCCTGGATTCCCTGAAGGTATCCTTGGTGGCGAACTTATGGACCGGTGCCGTCAGCAATCTGTTCGCTTCGGGACTGAGATCTTCACCGAGACAGTTTCCAAGGTCGATTTCTCAACTCGTCCTTTTAGGGTTTTTACTGACACAAGAACTGTTGAGGCTGATTCGGTTATCGTCGCTACCGGAGCTGTTGCCAAACGGTTACCGTTTACTGGTTCGGGAGAGGGTCCGGACGGTTTCTGGAACCGAGGGATCTCAGCTTGTGCCGTATGTGACGGCGCGGCTCCGATCTTTAGAAACAAGCCGTTGGCGGTGATTGGTGGCGGAGACTCGGCCATGGAGGAAGCAACGTTCCTAACAAAATACGGTTCTGAAGTTTATATAATCCATCGTAGGGATACGTTTAGGGCTTCGAAGATTATGCAGAGCAAGGTAGCGAACAATAGCAAAATTAAGGTGATATGGAACTCGTCGGTGGTTGAGGCGTATGGGGAAGGAGAGACCAAGAGATTGCTTGGGGGTTTGAAGGTGAAGAATGTGGTGACAGAAGAGGTTTCTGATTTGAAGGTTTCTGGATTGTTCTTTGCAATTGGTCATGAACCTGCGACCAAGTTCTTGGATGGTCAACTAGAACTTGATTATGATGGATACGTTGTGACAAAGCCAGGGACCACAGAGACTAGCGTTGAGGGAGTTTTTGCTGCTGGGGATGTTCAGGACAAGAAGTATAGACAAGCTATTACTGCTGCTGGAACTGGTTGCATGGCAGCTTTGGATGCAGAACATTTCCTGCAAGACATTGGTTCGCAACAGAATAAAAGTGATTGA 1107 0.4932 MKFRFCDYNHWSNLYNKARNLISTQRSSSATFAAMTDLNILKTKLCIIGSGPSAHTAAVYAARAELKPVLFEGWMANDIAPGGQLTTTTDVENFPGFPEGILGGELMDRCRQQSVRFGTEIFTETVSKVDFSTRPFRVFTDTRTVEADSVIVATGAVAKRLPFTGSGEGPDGFWNRGISACAVCDGAAPIFRNKPLAVIGGGDSAMEEATFLTKYGSEVYIIHRRDTFRASKIMQSKVANNSKIKVIWNSSVVEAYGEGETKRLLGGLKVKNVVTEEVSDLKVSGLFFAIGHEPATKFLDGQLELDYDGYVVTKPGTTETSVEGVFAAGDVQDKKYRQAITAAGTGCMAALDAEHFLQDIGSQQNKSD* 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g3349 368 Gene3D - 163 295 IPR036188 -
Psa2g3349 368 Pfam Pyridine nucleotide-disulphide oxidoreductase 44 345 IPR023753 GO:0016491
Psa2g3349 368 PANTHER THIOREDOXIN REDUCTASE 1-RELATED-RELATED 41 364 - -
Psa2g3349 368 TIGRFAM TRX_reduct: thioredoxin-disulfide reductase 44 357 IPR005982 GO:0004791|GO:0005737|GO:0019430
Psa2g3349 368 ProSitePatterns Pyridine nucleotide-disulphide oxidoreductases class-II active site. 181 203 IPR008255 GO:0016491
Psa2g3349 368 Gene3D - 47 356 IPR036188 -
Psa2g3349 368 PRINTS FAD-dependent pyridine nucleotide reductase signature 45 64 - -
Psa2g3349 368 PRINTS FAD-dependent pyridine nucleotide reductase signature 147 165 - -
Psa2g3349 368 PRINTS FAD-dependent pyridine nucleotide reductase signature 195 213 - -
Psa2g3349 368 PRINTS FAD-dependent pyridine nucleotide reductase signature 283 299 - -
Psa2g3349 368 PRINTS FAD-dependent pyridine nucleotide reductase signature 310 332 - -
Psa2g3349 368 PRINTS Pyridine nucleotide disulphide reductase class-II signature 44 66 - -
Psa2g3349 368 PRINTS Pyridine nucleotide disulphide reductase class-II signature 82 97 - -
Psa2g3349 368 PRINTS Pyridine nucleotide disulphide reductase class-II signature 103 113 - -
Psa2g3349 368 PRINTS Pyridine nucleotide disulphide reductase class-II signature 148 156 - -
Psa2g3349 368 PRINTS Pyridine nucleotide disulphide reductase class-II signature 174 186 - -
Psa2g3349 368 PRINTS Pyridine nucleotide disulphide reductase class-II signature 191 215 - -
Psa2g3349 368 PRINTS Pyridine nucleotide disulphide reductase class-II signature 243 259 - -
Psa2g3349 368 PRINTS Pyridine nucleotide disulphide reductase class-II signature 285 306 - -
Psa2g3349 368 PRINTS Pyridine nucleotide disulphide reductase class-II signature 320 338 - -
Psa2g3349 368 SUPERFAMILY FAD/NAD(P)-binding domain 42 356 IPR036188 -
Psa2g3349 368 PANTHER THIOREDOXIN REDUCTASE 41 364 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g3349 Psa-Chr2 376658075 376662250 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g3349 K00384 - gmx:100786086 645.966
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa2g3349 2 376658075 376662250 Psa2g3349 2 376658075 376662250 ECH