Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g3279 ATGGTAATGGGTTTGCCAAGGTTTGGTCGTCCAAAGAACGCTGATGAACTGAGCTCTAATCTATTCGTGGCAAATTGTGGACAAGCCGTGGGAATTTCCGATAATGATATTGTTTCTGTTTTCTGCAAATTTGGGGAACTCAATGGAGTTTATGCAGCTGATGATAGTGGCACACGTGTCATTGTATCTTATTCTGAAGTTAGTTCTGCACAATCTGCTCTAATGGCATTACATGGAAAGCCATGTCCTCAACTTGGAGGTCGTTCTTTGTATATTCGTTATTCAGTGCTTCAGCCAAATCCACAGGATCAAGTGAAGGACTTGGTTTCTGTATCTATGACAGCCTTAGATCTGAACATTCCCGGACTTTACCTAGTTCACGACTTCGTTAGTGCTAAAGAAGAAGAGGAATTGCTCCAGGCCGTTGACAGTAGGCCTTGGAATTGTCTTGCCAAAAGAAGGGTTCAACACTATGGTTATGAGTTTTGTTATGATATTCGGAATGTTAATACCAAGCGATGCTTAGGTGAGCTTCCCTCATTTCTGTCTCCAATACTTGAAAGAATATCATCATGTCCAACTTTCAAGAATGTTGACCCTGATAGCATAGTTTTGGACCAACTTACGGTAAATGAGTACCCACCTGGAGTGGGTTTATCGCCTCATATAGACACTCACTCTGCATTTGAAGATTTAATTTTCAGCCTTTCATTAGCGGGGCCTTGTATAATGGAATTCAGACGATATGAAGACGGCGACTGGCGCCCTAGAGTTGCCTCAAGCACTGTTACAAAAGTAGAAAGTCCAGAAGATGGCTCAAATTGTATTAAGAGGGCTATCTATCTCCCCCCTAGATCTTTGCTACTTTTATCCGGTGAAGCACGATATGCATGGCATCATTACATTCCACACCACAAGATTGACAAAGTGAATGGAAGAGTCATCCGAAGGGCTTCAAGAAGGGTATCTTTTACAATTCGTAAGGTTAGAGCAGGTTTGTGCAAATGTGAATTTCCTCAGTATTGCGACTCTCAAAGATGA 1041 0.4198 MVMGLPRFGRPKNADELSSNLFVANCGQAVGISDNDIVSVFCKFGELNGVYAADDSGTRVIVSYSEVSSAQSALMALHGKPCPQLGGRSLYIRYSVLQPNPQDQVKDLVSVSMTALDLNIPGLYLVHDFVSAKEEEELLQAVDSRPWNCLAKRRVQHYGYEFCYDIRNVNTKRCLGELPSFLSPILERISSCPTFKNVDPDSIVLDQLTVNEYPPGVGLSPHIDTHSAFEDLIFSLSLAGPCIMEFRRYEDGDWRPRVASSTVTKVESPEDGSNCIKRAIYLPPRSLLLLSGEARYAWHHYIPHHKIDKVNGRVIRRASRRVSFTIRKVRAGLCKCEFPQYCDSQR* 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g3279 346 Gene3D - 113 334 IPR037151 -
Psa2g3279 346 Gene3D - 9 112 IPR012677 -
Psa2g3279 346 PANTHER UNCHARACTERIZED 18 343 - -
Psa2g3279 346 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 204 330 IPR005123 -
Psa2g3279 346 SUPERFAMILY RNA-binding domain, RBD 12 102 IPR035979 GO:0003676
Psa2g3279 346 Pfam 2OG-Fe(II) oxygenase superfamily 164 327 IPR027450 -
Psa2g3279 346 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 19 97 IPR000504 GO:0003723
Psa2g3279 346 PANTHER ALKYLATED DNA REPAIR PROTEIN ALKBH8 HOMOLOG 18 343 - -
Psa2g3279 346 SUPERFAMILY Clavaminate synthase-like 120 330 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g3279 K10770 - gmx:100777529 597.816
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa2g3279 2 371275138 371280580 Psa2g3279 2 371275138 371280580 ECH