Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g3254 ATGGATGCTATAAGGAAGCAAGCTGCCAGATTGAGGGAACAAGTTGCCAAGCAACAACAGACTATACTTAGACAGTTGGGTCAACTTAGCAATGAACCCCTCATGGCCGATGAATCTGAACTTGAGTGTTACCAGAAACTTCAAAAATTATACACTTCTACAAAGACTGCTAAGCATTTTCAGCGCCATATTGTTCGTGGTATTGAAGGATTCATCTCTGTTAGTTCCAAGCAGATGGAGATAGTGAGGAAATTGGCTAAGGATTGTTGTAAATATGGGACTGAGAATAAGGATCACAGTAGTAATTATCCTCTTGCAAGGGCTTCTCTTCAATTCGGTAACTCATATGATATATTGGAAAATGAGAGGGAGACTTTGCTTGGGATCTTTTGTGATCAGATCTCTGAGCCACTGCGGGCTCAAATAACAGGAGCTCCTTTGGAAGATGCACGCCACCTCACCCACAACTATGACAAACTTCGTCAAGAAGTAGAAGGCCAGGCTGCTGAAGTTTTGAGGCGTAGATCAAAGTTGAGGGATTCTTCTCTTCCTTCAGACAGTTCCATGAGGCTTCAGAATGCAGAGAAAAGGTTGAAAGAACTTAAATCTGCCTTGGTGGCACTCGGTAGAGAAGCAACTTCTGCTATGTTGTCAGTTGAAGAACAACAGCAACATATAACTCTCCAGAGTCTTTCTACATCGGTGGATGCTGAGAAAGCCTATCATCGGCATGCCCTTGTTATTCTAGATAAACTATATGCTGAGATGATCATGATTGACGAGAGACAAACAAAAGACCCTACATCATTTCCACTCCAAAAAGATGGATATAATCAACCCGCAGATGAGAAACCTAATTCAAACGGCATTGATTATAAGCACGACACCCAAATGGGCACATACTTTTTTGCAAAGGTCATCCATACATTTGACGCTCAAGCTGAGGGGGAGTTAAGTTTATCAGTTGACGATTATGTTGTAATACGACAGGTTGCTACCAATGGATGGTCTGAAGGAGAATGCAATGGCAATGCCGGATGGTTTCCCTCCGCATATGTACAGAGACAGGACGTAGTACCAGCGAACAAGATACCGGAATAG 1101 0.4269 MDAIRKQAARLREQVAKQQQTILRQLGQLSNEPLMADESELECYQKLQKLYTSTKTAKHFQRHIVRGIEGFISVSSKQMEIVRKLAKDCCKYGTENKDHSSNYPLARASLQFGNSYDILENERETLLGIFCDQISEPLRAQITGAPLEDARHLTHNYDKLRQEVEGQAAEVLRRRSKLRDSSLPSDSSMRLQNAEKRLKELKSALVALGREATSAMLSVEEQQQHITLQSLSTSVDAEKAYHRHALVILDKLYAEMIMIDERQTKDPTSFPLQKDGYNQPADEKPNSNGIDYKHDTQMGTYFFAKVIHTFDAQAEGELSLSVDDYVVIRQVATNGWSEGECNGNAGWFPSAYVQRQDVVPANKIPE* 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g3254 366 MobiDBLite consensus disorder prediction 269 285 - -
Psa2g3254 366 PANTHER SH3 DOMAIN-CONTAINING 1 364 - -
Psa2g3254 366 Coils Coil 150 170 - -
Psa2g3254 366 Gene3D Arfaptin homology (AH) domain/BAR domain 42 257 IPR027267 -
Psa2g3254 366 Coils Coil 1 21 - -
Psa2g3254 366 ProSiteProfiles Src homology 3 (SH3) domain profile. 299 358 IPR001452 GO:0005515
Psa2g3254 366 Coils Coil 191 211 - -
Psa2g3254 366 SMART SH3_2 302 357 IPR001452 GO:0005515
Psa2g3254 366 SUPERFAMILY BAR/IMD domain-like 45 256 IPR027267 -
Psa2g3254 366 Gene3D SH3 Domains 287 364 - -
Psa2g3254 366 MobiDBLite consensus disorder prediction 265 287 - -
Psa2g3254 366 Pfam Variant SH3 domain 306 354 IPR001452 GO:0005515
Psa2g3254 366 SUPERFAMILY SH3-domain 301 360 IPR036028 GO:0005515
Psa2g3254 366 PANTHER SH3 DOMAIN-CONTAINING PROTEIN 1 1 364 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g3254 Psa-Chr2 369597204 369603520 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g3254 - - mtr:MTR_5g026400 612.838
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa2g3254 2 369597204 369603520 Psa2g3254 2 369597204 369603520 ECH