Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g3225 ATGGGTAAAGGTAATCCACAGAAATCAGGAACCGGCGGGGATCTTCACGCGGCGGCGAGGTCCGGCGATCTCATAGCAGTTCAGTCAATTTTGATTTCAAATCCTTTGTCCGTTAATTCCAGAGATAAGCATTCCAGAACACCACTTCATTTAGCAGCATTTTCTGGGCAAACTGAGGTAGTCAGTTACCTATGCAAGAACAAGGCTGATGTTGGTGCTTCCGCTATGGATGACATGGCTGCAATACACTTTGCGGCACAAAAGGGTCACTTAGAAGTTGTTCGGGCTCTGGTTTCGGCTGGTGCCTCTTTCAAAGCTGCTACTCGTAAAGGCATGACTCCATTACACTTTGCTGCTCAAGGCTCCCATTTGGAACTTGTCAAGTATTTGGCTAAGAAAGGGGCAAGTCTAAGTGTCAAGACAAAGGCGGGAAAGACTCCGTTGGATCTTGCTACCAATGATGAAGTCCGCACCTTTCTGGAGGGATTTGTAAAATCAGATAAGAATGAAGAATCGAGAAACGGAGATAAAGCTGAAGAATCTGATCCAAAGCAGAATGAAGGATCCAATCCAAAGGCAGACGAAGAATCTGATCCAAAAGAAAAGGAAGAATCCAATCGAAAGGCAGCTGAAGAATCTGATCCAAAAGAAAAGGAAGAATCCAATCGAAAGGCAGCTGAAGAATCTGACTCAAAAGCATCCTCCTTGGGATTCAAAGGTGATGAACCTCCTACAGTTGCTGTTGATGAAGAAGAGGGAGAAAGAGGAAAGAGGAAGGTTAATGAAAATGATGCAACAGAAGACTCATCGAAACCAAAAAAGGCAAGAGTTAAGCTAAGCCACCTTCAAAGCTCAGATGATGCTGAAGAAGAAGAAAACTGA 882 0.4422 MGKGNPQKSGTGGDLHAAARSGDLIAVQSILISNPLSVNSRDKHSRTPLHLAAFSGQTEVVSYLCKNKADVGASAMDDMAAIHFAAQKGHLEVVRALVSAGASFKAATRKGMTPLHFAAQGSHLELVKYLAKKGASLSVKTKAGKTPLDLATNDEVRTFLEGFVKSDKNEESRNGDKAEESDPKQNEGSNPKADEESDPKEKEESNRKAAEESDPKEKEESNRKAAEESDSKASSLGFKGDEPPTVAVDEEEGERGKRKVNENDATEDSSKPKKARVKLSHLQSSDDAEEEEN* 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g3225 293 PANTHER - 1 292 - -
Psa2g3225 293 SUPERFAMILY Ankyrin repeat 15 155 IPR036770 -
Psa2g3225 293 MobiDBLite consensus disorder prediction 244 286 - -
Psa2g3225 293 MobiDBLite consensus disorder prediction 162 293 - -
Psa2g3225 293 ProSiteProfiles Ankyrin repeat region circular profile. 110 142 - -
Psa2g3225 293 ProSiteProfiles Ankyrin repeat profile. 110 142 IPR002110 GO:0005515
Psa2g3225 293 SMART ANK_2a 110 139 IPR002110 GO:0005515
Psa2g3225 293 SMART ANK_2a 44 73 IPR002110 GO:0005515
Psa2g3225 293 SMART ANK_2a 77 106 IPR002110 GO:0005515
Psa2g3225 293 Pfam Ankyrin repeats (3 copies) 82 160 IPR002110 GO:0005515
Psa2g3225 293 Pfam Ankyrin repeats (3 copies) 15 73 IPR002110 GO:0005515
Psa2g3225 293 ProSiteProfiles Ankyrin repeat region circular profile. 44 71 - -
Psa2g3225 293 PANTHER ANKYRIN REPEAT PROTEIN 1 292 - -
Psa2g3225 293 Gene3D - 11 185 IPR036770 -
Psa2g3225 293 MobiDBLite consensus disorder prediction 162 230 - -
Psa2g3225 293 PRINTS Ankyrin repeat signature 45 60 IPR002110 GO:0005515
Psa2g3225 293 PRINTS Ankyrin repeat signature 126 140 IPR002110 GO:0005515
Psa2g3225 293 ProSiteProfiles Ankyrin repeat profile. 77 109 IPR002110 GO:0005515
Psa2g3225 293 ProSiteProfiles Ankyrin repeat profile. 44 76 IPR002110 GO:0005515
Psa2g3225 293 ProSiteProfiles Ankyrin repeat region circular profile. 77 103 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g3225 15 178 Miscellaneous Gene Families AT1G05640 35.838 3.09e-14 70.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g3225 - - mtr:MTR_5g026800 414.461
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa2g3225 2 368071136 368073674 Psa2g3225 2 368071136 368073674 ECH