Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g3198 ATGTCTGGTGTTCATTTTCGATCGCATAATTTGTTGATGCAACTCAAACTTGTTGAGGCCATCAAGGAAGCTGGAAATGTTAAGCGGTTCCTGCCTTCGGAATTTGGCATGGATCCAGCTCTTATGGGACATGCACTTCAACCAGGAAGAGTGACATTTGATGAGAAAATGACTATAAGAAAAACAATTGAGGATGCTAACATCCCTTTCACTTACATCTCCGCCAATTGCTTCGCCGCTTACTTTGCCGGCAACCTCTCCCAGATGGGAACACTCTTTCCTCCGCGGGACAAGGTGGTTCTCTATGGCGACGGCAATGTCAAAGTTGTTTATATGGATGAAGATGATGTTGCAACATACACAATCAAGACAATTGATGATCCAAGAACATTGAACAAGACAATATATCTAAGGCCACCAGAAAACATACTCACTCAAAGAGAGCTTATTGAGAAATGGGAGAAACTTATTGGAAAGCGACTAGAGAAATCTACCATATCTGAAAATGACTTTCTTTCTTCCATGAAAGGTTTAGACTTTGCAAATGAAGTAGGCATGGGACATTTCTATCATATTTTCTATGAAGGGTGTTTGGCAAATTTTGAAGTAGGGGATGAAGAAGAAGCATCGAAGCTTTATCCAGAAGTTGTCAAGTTGGAAACTTTTTCGCTGAAAAATGGTGGGTTTATCAGAATTAGAGGTCTTAACACTCTTTCAAAGGTACCCAGAAATCCAAAATTAGCAATACGTTGTTCTGTTTCGGCTTCGGGTGATGCAAATTCCTCTGTTCAGACTGATGTTCCTTTCCCTTTTGATTACTCTGAACTTCTTGAACAAGCTGGAGTGGCAGTGGAATTGGCCATGAAGGATAACAAAAAGCTAATGGAAATTGAGTTTCCCACAGCCGGACTCACATCCGTACCAGGTGATGGTGAAGGTGGAATAGAGATGACCGGAAGCATGCAATTGATTCGTGAATTTTGTGACCGCTTCATTTTGTCCGAGAAAACCACACGAACAAGAATATTTTTTCCAGAAGCTAATGAAGTCGACTTTGCTAGACAATCCGTCTTCAGTGGAGCTTCTTTTAAGTTGGACTATCTGACAAAGCCTTCATTCTTCGAAGATTTTGGTTTTGTTAAGAAAGTAAAAATGTCTGACAGAGTGAAGGAAGAAGATGAACTTTTCATAGCAGCCTATCCGTATTTCAATGTCAATGAAATGCTTGTTGTGGAAGAACTTTACAGAGAGGCTGTCTTGAATACTGATCGGAAACTGATTATTTTTAACGGAGAACTCGATCGTATCAGATCTGGGTATTATCCACCGTTCTTTTACCCGAAGCTTGCTGAACTTACGAAGTCCTTTCTACCTGCGATGGAAACTGTGTACTACATTCATAATTTCAAGGGTCGTAACGGAGGAGTTCTTTTCAGGTGCTATCCGGGTCCTTGGAAGATCCTGAGAAGAGTGGGGAATAGTAAATATGTTTGTCTACATCAGCAGGATACTATGCCATCCCTCAAGGAAGTTGCTCTTGAGATTCTTCCAACAAATTGA 1560 0.4083 MSGVHFRSHNLLMQLKLVEAIKEAGNVKRFLPSEFGMDPALMGHALQPGRVTFDEKMTIRKTIEDANIPFTYISANCFAAYFAGNLSQMGTLFPPRDKVVLYGDGNVKVVYMDEDDVATYTIKTIDDPRTLNKTIYLRPPENILTQRELIEKWEKLIGKRLEKSTISENDFLSSMKGLDFANEVGMGHFYHIFYEGCLANFEVGDEEEASKLYPEVVKLETFSLKNGGFIRIRGLNTLSKVPRNPKLAIRCSVSASGDANSSVQTDVPFPFDYSELLEQAGVAVELAMKDNKKLMEIEFPTAGLTSVPGDGEGGIEMTGSMQLIREFCDRFILSEKTTRTRIFFPEANEVDFARQSVFSGASFKLDYLTKPSFFEDFGFVKKVKMSDRVKEEDELFIAAYPYFNVNEMLVVEELYREAVLNTDRKLIIFNGELDRIRSGYYPPFFYPKLAELTKSFLPAMETVYYIHNFKGRNGGVLFRCYPGPWKILRRVGNSKYVCLHQQDTMPSLKEVALEILPTN* 520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g3198 519 Pfam Domain of unknown function (DUF1995) 270 512 IPR018962 -
Psa2g3198 519 Pfam NmrA-like family 6 160 IPR008030 -
Psa2g3198 519 Gene3D - 76 216 - -
Psa2g3198 519 PANTHER PROTEIN LOW PSII ACCUMULATION 3, CHLOROPLASTIC 251 518 IPR044687 -
Psa2g3198 519 Gene3D - 6 214 - -
Psa2g3198 519 PANTHER PROTEIN LOW PSII ACCUMULATION 3, CHLOROPLASTIC ISOFORM X1 251 518 - -
Psa2g3198 519 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 10 184 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g3198 Psa-Chr2 366139246 366165428 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g3198 - - ahf:112747489 500.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa2g3198 2 366139246 366165428 Psa2g3198 2 366139246 366165428 ECH