Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g3197 ATGTCTCAAGAAATTTGCATTCTACCATTTTCCGGACAAGGCCATCTTTTACCATGCTTCCAACTATGTAACCATTTAACTTCCTCAAATTTGCATGTCACTCTTCTCATCTCCTCCGACCTCTCCACCTCCGTTCCCTCTTCTCTCCATCAACACCCTCTCTTTCAACTCACCCTAATCCCATCGCCACCTCCTTCGCCGGAACACCACCACGAGCTTGCTAGAGGACTCCAAAATATCCTCGCTAACTACCATCGTCCAACCTTACCCGTTTGTGCAATTGTCGATGCCATGATGAGCTGGTCAATCGATGTTTTCAAAGAGTTTAAAATTCCAACGGTGGCGTTCTTAACCAACGGCGCATGCTCCGCCGCTATGGAGCTCGCGGTATGGAAAGCCCAGCCGTTAGACTTGAAACCCGGCGAAATCCGCTTTCTTCCCGGCTTACCAGATGACATGGCGGTTACCTACTCGGATCTAAATCAACGTCATCACAGGCCTCCTCATCCTCATCCTCACCCGCAGCACGGTTTTCCTCCGCCTCCGCTTGGATTTGGCCATAGAAAGAGGGGCCCACCAAAAGATGGAGAACAGCCACCATGGCTGAATGAGACACAAGAAGCAACTGCTTTGTTGATCAACACGTGTGATGATCTGGAGCATCCTTTTATCAACTACATCGCGAACTACGTCGGAAAACCAGTGTGGGGTGTTGGACCGCTTTTGCCAGAGCAATATTGGAAATCCTCCGGTTCAGTTCTCCACGACAGTGATTTCCGGTCGAACCGGTTATCCAGCGTGACCGAGAAAGAAGTGAACCAGTGGTTAGATTCAAAGCCACGTGGATCAGTTTTATACGTGTCGTTCGGTACAGAGGTAGGACCGACATTAGAAGAATACGCGGAACTAGCTCAAGCAATGGAGTCATGTGAGCAACCGTTTATATGGGTAATCCAATCCGGTTCAGGTAGACCGGGTCCAGGAAAACCGGAAGCAGAAGAAGGATATTTTCCTCATGGATTGGATGAAAGAGTTGGGAATAGAGGTTTGATAATACGCGGTTGGGCGCCACAGCTGTTGATACTGAGTCACAAATCAACGGGTGGATTTTTATCTCATTGTGGTTGGAATTCGACACTGGAGGCTATTGGACATGGGATTCCGATGTTGGCATGGCCTATAAGGGGTGATCAACACCATGACGCTAAGTTGGTTGTGAGTCATCTTAAGATTCCTTCACTCAAGCTTCATGTGGCACTAAGACTCTAA 1269 0.4846 MSQEICILPFSGQGHLLPCFQLCNHLTSSNLHVTLLISSDLSTSVPSSLHQHPLFQLTLIPSPPPSPEHHHELARGLQNILANYHRPTLPVCAIVDAMMSWSIDVFKEFKIPTVAFLTNGACSAAMELAVWKAQPLDLKPGEIRFLPGLPDDMAVTYSDLNQRHHRPPHPHPHPQHGFPPPPLGFGHRKRGPPKDGEQPPWLNETQEATALLINTCDDLEHPFINYIANYVGKPVWGVGPLLPEQYWKSSGSVLHDSDFRSNRLSSVTEKEVNQWLDSKPRGSVLYVSFGTEVGPTLEEYAELAQAMESCEQPFIWVIQSGSGRPGPGKPEAEEGYFPHGLDERVGNRGLIIRGWAPQLLILSHKSTGGFLSHCGWNSTLEAIGHGIPMLAWPIRGDQHHDAKLVVSHLKIPSLKLHVALRL* 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g3197 422 PANTHER EG:EG0003.4 PROTEIN-RELATED 3 411 - -
Psa2g3197 422 Gene3D Glycogen Phosphorylase B; 270 418 - -
Psa2g3197 422 PANTHER GLYCOSYLTRANSFERASE 3 411 - -
Psa2g3197 422 CDD GT1_Gtf-like 5 408 IPR002213 GO:0008194
Psa2g3197 422 Gene3D Glycogen Phosphorylase B; 1 253 - -
Psa2g3197 422 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 270 407 IPR002213 GO:0008194
Psa2g3197 422 ProSitePatterns UDP-glycosyltransferases signature. 355 398 IPR035595 -
Psa2g3197 422 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 4 410 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g3197 Psa-Chr2 366124455 366125951 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g3197 5 411 Glycosyltransferase AT1G51210 30.394 4.55e-48 168
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g3197 - - jre:108980936 523.857
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa2g3197 2 366124455 366125951 Psa2g3197 2 366124455 366125951 ECH