Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g3173 ATGGCTGCTCTGCAATACCTGGAATCCCTTCGAAGTTCTCACCCCGAGCTTGGCGAATGGTACAATTCTCTTGCGGATCTGTACCAGAACAAGCTATGGCATCAGCTTACTCTCAAGCTCGAACAGTTCGTCGCTCTTGCCGTTTTCCAGGCCGGTGATGCTTTGATACATATTTCAGTGGAGTCTCTCTCTGATTCATTCAAGCTGGATTTGGCATTTGACCTGTCTCTTTCTGCTCTGTTGGGGGATAACATATACAACTTTGGAGAGCTACTTGCCCATCCTATTATTAAGAGCCTCCTAGGGACAAAGGTGGAATGGCTCTACTACATTCTGCAGGCATTCAATTCTGGTGATTTGGTTCGATATCAAGAATTATGTCAGGTGCATAATGCTGCTTTAAGGGCTCAACCGGCACTAGTTCAAAACGAACAGAAGCTGTTGGAAAAGATCAACATTCTCTGTCTGATGGAAATTATATTCAGTCGGCCTTCGGAAGATCGTACTATTCCATTGAGTGCAATTGCAGAGCGTACAAAGCTTTCTATAGAGGATGTGGAGCATCTTCTTATGAAGAGCCTATCTGTTCATCTGATTGAGGGTATTATTGATCAAGTGGAGGGCACAGTACATGTTTCCTGGGTGCAACCAAGAGTTCTTGGTATTCAACAGATAAAATCCTTACGGGATCGACTGGACAGTTGGACAGGAAAAGTACACACGGCGTTGTTGTCCATCGAGGCTGAGACACCCGATTTAATTGGATCATGA 771 0.4475 MAALQYLESLRSSHPELGEWYNSLADLYQNKLWHQLTLKLEQFVALAVFQAGDALIHISVESLSDSFKLDLAFDLSLSALLGDNIYNFGELLAHPIIKSLLGTKVEWLYYILQAFNSGDLVRYQELCQVHNAALRAQPALVQNEQKLLEKINILCLMEIIFSRPSEDRTIPLSAIAERTKLSIEDVEHLLMKSLSVHLIEGIIDQVEGTVHVSWVQPRVLGIQQIKSLRDRLDSWTGKVHTALLSIEAETPDLIGS* 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g3173 256 SUPERFAMILY "Winged helix" DNA-binding domain 145 218 IPR036390 -
Psa2g3173 256 ProSiteProfiles PCI domain profile. 44 217 IPR000717 -
Psa2g3173 256 PANTHER 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 13 56 254 IPR035298 -
Psa2g3173 256 PANTHER 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 13 1 57 IPR035298 -
Psa2g3173 256 SMART PINT_4 142 235 IPR000717 -
Psa2g3173 256 Gene3D - 93 213 - -
Psa2g3173 256 PANTHER 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 13 HOMOLOG B 1 57 - -
Psa2g3173 256 PANTHER 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 13 HOMOLOG B 56 254 - -
Psa2g3173 256 Pfam PCI domain 108 213 IPR000717 -
Psa2g3173 256 SMART motif in proteasome subunits, Int-6, Nip-1 and TRIP-15 142 235 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g3173 K03039 - gmx:100804455 361.688
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa2g3173 2 363976553 363981095 Psa2g3173 2 363976553 363981095 ECH