Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g3170 ATGGATAAAGGACGTAGAAAATGTCTTATTTTATGGCACCGGATTCAAGATTGGGCTGACATTTTACTACAGTTTGCGAAAGATAATGGACTGGAAGATGGTGTTGTGACAATTGAGGAAATACGCTTTGGAACTGAATCTCAAGGAACGGAACTTCAAGGGATAGACAGAACTATTTTGAACCGTGCATTGAAACTATTAGAACAGAAGGGGAAGCTTGTGGTCTTTAAAGGAACTTCAACAGATGATGAAGGAATTAAGTTTTCTGTATAA 273 0.3773 MDKGRRKCLILWHRIQDWADILLQFAKDNGLEDGVVTIEEIRFGTESQGTELQGIDRTILNRALKLLEQKGKLVVFKGTSTDDEGIKFSV* 91
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g3170 90 Pfam ESCRT-II complex subunit 3 56 IPR008570 GO:0000814|GO:0071985
Psa2g3170 90 Gene3D - 10 89 IPR036388 -
Psa2g3170 90 PANTHER VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN VPS25 1 89 IPR008570 GO:0000814|GO:0071985
Psa2g3170 90 SUPERFAMILY "Winged helix" DNA-binding domain 13 88 IPR036390 -
Psa2g3170 90 PANTHER VACUOLAR PROTEIN-SORTING-ASSOCIATED PROTEIN 25 1 89 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g3170 Psa-Chr2 363885632 363888942 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g3170 K12189 - gmx:100803388 172.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa2g3170 2 363885632 363888942 Psa2g3170 2 363885632 363888942 ECH