Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g2830 ATGTTTGGTGCGATAAATAGAGTGATGGAAGAAAGTGAAAAGCTAAAAACTGAAGAGAATGGAGAATCAGAAGAAATAACATGGAGTTCGGGTGCTGGAACAGATGGTCTCTCTCTTGACTGCTCCGTCCTCGATCTCAAGGACTCAACCAACGCCGCCGCAATTGCCGCCGATCCTTCCTTTGATGTCACTGGTAATTCCAAAAAGCTACCTTTTGTAGAAGAGAAGAAAGAATCAGAAGACAGACTATGGAGTTGGGGTGCTGGAACAGATGGTCAATTAGGAACTGGTAGACTTCAAGATGAACATCTTCCTCGACTATTGTCTCTCCCTTCTGTCTCTACACTTGCCTGCGGCGGCGCTCATGTCATCGCCTTAACCTCTGCTGGGAAGGTATTGTCATGGGGTAGGGGCAATTCTGGTCAACTAGGTCATGGAGAGATTGTCAATAGCATGTTGTATCCCAAGGCTGTAACATCATTGGACAACCACTTCATAACCTATGTCTCTGCTGGTTGGAGTCACTCGGGTTTTGTTTCAGATAGTGGAAGCCTATTCACTTGTGGGGATGGCTCTTTTGGTCAACTTGGACATGGAGATTATGGCTCTCACAGTTCCCCTGTTAAAGTGTCCTGCTTTGTTGATCAGCATGTTGCAGAGGTAGCATGTGGAATGCGACATTCTCTTGTCTTGTTGAAAGGTTGTCTTTCAAGTCAAGTTTATGGATTCGGCTCTGGAAAGCGTGGTCAATTGGGTTTCTCAAAAGATAAAATCAAATTGATTAATCTTCCTAAAGTTGTTAGTGGATTTGAAGATGTTGATATAGTTGGAATTGCTGCAAATGGAGATCACAGTGCTTCATTATCTGTTGATGGGAATCTTTACACCTGGGGAAGAGGCTTCAAGGGCTTTGAAGATTCTCTCCTTCCACAATGCTTAAACTCTACGTTGAAATTCACTAAAGCCACTCTAGGGTGGAACCATGCTTTAGCCATGACTGGTGATGGGGAGGCTTATATGCTTGGTGGCAACCACCTTGGAGTGCTTAGTGATCTTCGCAATGAATGTCCAGCTAAGAAGTTAAATGATTCAAGAGAAGCCAACTTGGAGAAAGTCCCTGGCCTTGATGGAGTAAAGATTACTGACATTGCTACTGGAGCTGAGCATTCTGTTCTGGTCACAGAGAATGGAGAAATAAAGACATGGGGTTGGGGTGAGCATGGTCAGCTAGGGCTAGGGGATGCTAATGACCAAATCAGTCCTGTTACTGTAAGTCTTGGTTATGATCTGAATGAAGCGGCGTCAACCAGAGTTTATTGCGGAAGTGGCTTCACATTTGCTGTAACCAAGCCCTAA 1356 0.4462 MFGAINRVMEESEKLKTEENGESEEITWSSGAGTDGLSLDCSVLDLKDSTNAAAIAADPSFDVTGNSKKLPFVEEKKESEDRLWSWGAGTDGQLGTGRLQDEHLPRLLSLPSVSTLACGGAHVIALTSAGKVLSWGRGNSGQLGHGEIVNSMLYPKAVTSLDNHFITYVSAGWSHSGFVSDSGSLFTCGDGSFGQLGHGDYGSHSSPVKVSCFVDQHVAEVACGMRHSLVLLKGCLSSQVYGFGSGKRGQLGFSKDKIKLINLPKVVSGFEDVDIVGIAANGDHSASLSVDGNLYTWGRGFKGFEDSLLPQCLNSTLKFTKATLGWNHALAMTGDGEAYMLGGNHLGVLSDLRNECPAKKLNDSREANLEKVPGLDGVKITDIATGAEHSVLVTENGEIKTWGWGEHGQLGLGDANDQISPVTVSLGYDLNEAASTRVYCGSGFTFAVTKP* 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g2830 451 PANTHER OS01G0777800 PROTEIN 83 445 - -
Psa2g2830 451 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 81 129 IPR000408 -
Psa2g2830 451 ProSitePatterns Regulator of chromosome condensation (RCC1) signature 2. 221 231 IPR000408 -
Psa2g2830 451 MobiDBLite consensus disorder prediction 9 23 - -
Psa2g2830 451 PRINTS Chromosome condensation regulator RCC1 signature 82 98 IPR000408 -
Psa2g2830 451 PRINTS Chromosome condensation regulator RCC1 signature 132 148 IPR000408 -
Psa2g2830 451 PRINTS Chromosome condensation regulator RCC1 signature 325 343 IPR000408 -
Psa2g2830 451 PRINTS Chromosome condensation regulator RCC1 signature 392 413 IPR000408 -
Psa2g2830 451 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 336 396 IPR000408 -
Psa2g2830 451 Pfam Regulator of chromosome condensation (RCC1) repeat 182 231 IPR000408 -
Psa2g2830 451 Pfam Regulator of chromosome condensation (RCC1) repeat 239 286 IPR000408 -
Psa2g2830 451 Pfam Regulator of chromosome condensation (RCC1) repeat 80 126 IPR000408 -
Psa2g2830 451 Pfam Regulator of chromosome condensation (RCC1) repeat 397 448 IPR000408 -
Psa2g2830 451 Pfam Regulator of chromosome condensation (RCC1) repeat 130 178 IPR000408 -
Psa2g2830 451 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 238 291 IPR000408 -
Psa2g2830 451 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 130 182 IPR000408 -
Psa2g2830 451 SUPERFAMILY RCC1/BLIP-II 371 450 IPR009091 -
Psa2g2830 451 PANTHER REGULATOR OF CHROMOSOME CONDENSATION 83 445 - -
Psa2g2830 451 SUPERFAMILY RCC1/BLIP-II 80 350 IPR009091 -
Psa2g2830 451 ProSitePatterns Regulator of chromosome condensation (RCC1) signature 2. 383 393 IPR000408 -
Psa2g2830 451 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 397 451 IPR000408 -
Psa2g2830 451 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 183 234 IPR000408 -
Psa2g2830 451 MobiDBLite consensus disorder prediction 1 31 - -
Psa2g2830 451 Gene3D - 305 450 IPR009091 -
Psa2g2830 451 Gene3D - 49 304 IPR009091 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g2830 Psa-Chr2 328500852 328504221 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g2830 - - gmx:100793672 630.557
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa2g2830 2 328500852 328504221 Psa2g2830 2 328500852 328504221 ECH