Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g2762 ATGTTGGAGGGTCGTTCCTGTGTTGTTCCGAGGTTGTTTTGTAGCGCTTGTGAAACGGAGAACGATTGGTCTTACATGAAGTACATGCTGGATTTGGATATCAAAAATGGGAAGAGACCGATGGAAATTGATGATGCTGAGGATGAACATCATCCTAAGAAGTGTACTAAGATGTTGGAGTCTTGTCACATAGTTGAAACGGTCTGTCTTTCGTTTCAGCAGAATAAGGATTCTGCTCTTTCCCGGGTAGATCAGGAAATCGTTGAACATGTGGATGTTTGTGAAGGGGTGAACCCTGGTGACTCAATGGATTCATTGGATTCTGGTGTTCAGCAATCTGATGAGGAGCAGCAGGCTGGAGATTCGTCGGATTCTGGTTCACTTTTGCCGCGGATGAACCGAGACAGCTCGATTGCTTGTCTCAGCCGCTGTTCGAGGTCTGATTATGGTTCGCTTGCTTCTCTTAATAGGAGCTTTCGTAACATAATTCGGAGCGGCGAGCTCTATACATGGAGGAGACTAAATGGTATCATGGAACATTGGGTTTATTTCTCATGTGCTCTCCTTGAATGGGAGGCCTACGATCCGATTCGTCAAAGATGGATGCATTTGCCGAGGATGGCTTCGAATGAATGCTTCATGTGTTCTGATAAGGAGTCTTTAGCCGTAGGAACTGAACTTCTTGTGTTTGGGAGGGAGCTAAGATCTCATGTGATTTATCGATACAGTCTTTTGACTAACTCGTGGTCATCAGGAATGAGAATGAATGCTCCGAGATGTTTGTTTGGCTCTGCAAGCCTCGGTGAGATTGCGATATTAGCAGGTGGTTGTGATTCGGAGGGACGTATACTTGACTCGGCCGAACTATACAACTCAGAGGCACAAACATGGGAGCTTCTCCCGAGTATGAAAAAACCAAGGAAGATGTGTTCTGGTGTATTTATGGACGGAAAATTTTATGTTATAGGCGGAATCGGTGGACGCGATTCCAAGCTTCTTACTTGCGGGGAGGAGTACAATTTACAGACTAGAACATGGACGGAGATTCCTAACATGTCACCCGGACGAAGTAGTAGGGGTTCTGATATGCCTGCTACAACCGAGGCACCGCCTCTTGTCGCCGTTGTAAATAACGAATTGTACGCTGCTGATTATGCTGACATGGAAGTTAAAAAGTACGACAAGGAAAGAAAACTGTGGAATACCATTGGGAGACTTCCGGAACGAGCGGTTTCGATGAACGGCTGGGGTCTTGCATTTAGGGCATGTGGAAATAGGCTTATTGTTATTGGTGGACCAAGGACTCATGGCGAGGGTTTCATCGAGCTCAATTCTTGGGTTCCTAGTGAAGGACCTCCGCAATGGCGTCTACTCGATCGAAAACAACGATCCGGTAACTTTGTCTATAATTGTGCTGTGATGGGTTGTTGA 1431 0.4598 MLEGRSCVVPRLFCSACETENDWSYMKYMLDLDIKNGKRPMEIDDAEDEHHPKKCTKMLESCHIVETVCLSFQQNKDSALSRVDQEIVEHVDVCEGVNPGDSMDSLDSGVQQSDEEQQAGDSSDSGSLLPRMNRDSSIACLSRCSRSDYGSLASLNRSFRNIIRSGELYTWRRLNGIMEHWVYFSCALLEWEAYDPIRQRWMHLPRMASNECFMCSDKESLAVGTELLVFGRELRSHVIYRYSLLTNSWSSGMRMNAPRCLFGSASLGEIAILAGGCDSEGRILDSAELYNSEAQTWELLPSMKKPRKMCSGVFMDGKFYVIGGIGGRDSKLLTCGEEYNLQTRTWTEIPNMSPGRSSRGSDMPATTEAPPLVAVVNNELYAADYADMEVKKYDKERKLWNTIGRLPERAVSMNGWGLAFRACGNRLIVIGGPRTHGEGFIELNSWVPSEGPPQWRLLDRKQRSGNFVYNCAVMGC* 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g2762 476 PANTHER GALACTOSE OXIDASE/KELCH REPEAT PROTEIN-RELATED 1 476 - -
Psa2g2762 476 PANTHER F-BOX/KELCH-REPEAT PROTEIN SKIP11 1 476 - -
Psa2g2762 476 MobiDBLite consensus disorder prediction 105 128 - -
Psa2g2762 476 Gene3D - 174 458 IPR015915 GO:0005515
Psa2g2762 476 Pfam Kelch motif 306 353 IPR006652 GO:0005515
Psa2g2762 476 Pfam Kelch motif 258 303 IPR006652 GO:0005515
Psa2g2762 476 SMART kelc_smart 318 378 IPR006652 GO:0005515
Psa2g2762 476 SMART kelc_smart 226 269 IPR006652 GO:0005515
Psa2g2762 476 SMART kelc_smart 270 317 IPR006652 GO:0005515
Psa2g2762 476 SUPERFAMILY Kelch motif 188 458 IPR015915 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g2762 Psa-Chr2 319542941 319546926 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g2762 135 351 EF-hand Containing Proteins AT4G39560 26.147 1.44e-07 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g2762 - - gmx:100818865 802.742
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa2g2762 2 319542941 319546926 Psa2g2762 2 319542941 319546926 ECH