Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g2649 ATGTCTAGCTTCACTCATGCCACCACACTACTCCATGCTCACATCAAAACCAAACACAAAATCACTTCAAACAACAACATTAACAACAACCACAACAAAAACAACCTTTCATCTTCTAAACAAAATGCAACCAATAGAAGAAATTTAATTTCAACATTTCTAGCTACATCGATGGTTGTTGGCACAGCACCATCAGCATCAGCACAGAATTGGGGCACTCGTTCTTTCCTGAGAGAACATTTTTTTCAGCCAGGGCTTTCCCCTGAAGATGCGGTTTTAAGGATAAAACAAACAGCTGAAGGGTTACATAATCTTAGGGAAATGTTGGAAACTTTGTCTTGGAGGTATGTTATGTTTTATATAAGATTGAAACAGAATTATCTTGAACAGGATTTGAAAAATGCTATGACTACTTTACCGGAAAATCGTCGCAAGGAGTATGTCAAAACTGCTAACGAATTGGTTGATCACTTGACTGAGATGGATCGTTATGTTCGATCGCCAAAGGTATATGAGTCGTATTTATACTACGAGAAGACATTGAAATCAATAGATGAACTTGTAGCTATATTAGCATAG 579 0.3713 MSSFTHATTLLHAHIKTKHKITSNNNINNNHNKNNLSSSKQNATNRRNLISTFLATSMVVGTAPSASAQNWGTRSFLREHFFQPGLSPEDAVLRIKQTAEGLHNLREMLETLSWRYVMFYIRLKQNYLEQDLKNAMTTLPENRRKEYVKTANELVDHLTEMDRYVRSPKVYESYLYYEKTLKSIDELVAILA* 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g2649 192 Pfam Oxygen evolving enhancer protein 3 (PsbQ) 69 192 IPR008797 GO:0005509|GO:0009523|GO:0009654|GO:0015979|GO:0019898
Psa2g2649 192 MobiDBLite consensus disorder prediction 20 41 - -
Psa2g2649 192 Gene3D - 54 191 IPR023222 -
Psa2g2649 192 SUPERFAMILY Oxygen-evolving enhancer protein 3, 81 192 IPR023222 -
Psa2g2649 192 PANTHER OXYGEN-EVOLVING ENHANCER PROTEIN 3-1, CHLOROPLASTIC 1 192 IPR008797 GO:0005509|GO:0009523|GO:0009654|GO:0015979|GO:0019898
Psa2g2649 192 MobiDBLite consensus disorder prediction 15 41 - -
Psa2g2649 192 ProSiteProfiles Ras guanine-nucleotide exchange factors N-terminal domain profile. 142 192 IPR000651 -
Psa2g2649 192 PANTHER PHOTOSYNTHETIC NDH SUBUNIT OF LUMENAL LOCATION 2, CHLOROPLASTIC 1 192 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g2649 K08901 - gmx:100807480 251.136
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa2g2649 2 303679286 303680483 Psa2g2649 2 303679286 303680483 ECH