Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g2642 ATGTATTCTTCCAGAGGGAGTGGCGCTTACGGCCAAGCGTACACAGGTCAATCCGGATACGGTCAAAACCTGAGTACTAATTATTCCGGAGCTTCCGTTGGTGGACATGATGCTGCCCAGCATTCTGCAGCTTCAAGGCATTCAGGTATATTAGGTAGTTCTCAGGAGGCTGATGTTGGTAACTATAGGGCTCATACCGCTGTTGCTCAGTATGGAGGACAGTATAGTTCTGTTTATGGGTCAGCTGCTTTGAGCACAGCTCCGCAGGTTCCTTCATTGGGTACCAAGGGAGCTGCTTCATCAGCTTTAGATGCTCGTGGAGGGTATTCTTTAGGTGTTTCAGATTCACCCAAGTTTGCTTCTGGTGACTATGTTCCCTCTTCAAGCCATGGGTATGGCCACAAATCTGATCAATTGTATGGTGACAAGAGTTTGGATTATTCTGGACTAGATAGAAGGCAATATGGAGAACGACCGAGTGGTTACGTTGGTAGGGATTTACCGAGTGATCAAACTGGACGCTATTCTACTGATGCTGTTGGATACAATCATCCACATCAGGGAACTTTGCTTCGACAAGAGCAATTGCTGAAATCTCACTCTCTGCAAGCTGCTTCACTGGATGGGGGGGCTAGACAAACTGATTATCTTACAGCTAGGGCTGCTGCAAGTCGCCATCCAACCCAAGATCTAATGTCTTATGGAGGAAGGATCGATTCCGATCCCCATGCTTCATCAATGCTAAGTGCTACTTCCTATAGTGGACAACATGCACCATCAATACTAGGAGCAGCACCAAGGAGAAACGTGGATGATCTTTTGTATTCCCAGAATGCGTCAAATCCTGGTTATGGAGTGAGCCTGCCACCTGGTAGGGACTATGCCAGCGGAAAAGGTATTCATGGAAATGCTATGGATTTAGATTACCCAGGAAATCTGCTGCCACATGGTGGACCTACTGATCGGAAGGATGACCGGGCTAGTTATCTTCGGGAATTTGAACTAAGGGAAGACGAACGACGTCGGGACCGCTTGCGTGATAGAGATAGGGACAGAGAAAGAGACAAAGAACGTGAACGATTGCGAGAACGGGAGCGAGAACGAGAAAAGGAGCGGGAAAAGGAGCGCATGTTGGAACGGCGTGAAAAGGAGAGGGAGCGAGAACGCAAACGAGCACTTGAAGTTAGGCCTGAACGAACTCCAGTCAGATCCTCCAAGGACCCTCGTAGTACTTCGAAGGATCCTCGCGGGTCGTCTTTGACGAAGGAGGGGAAATCTTCACGACGGGACTCCCCACATCGTGCTTTACATAGGCACCGTTCACCTGTTAAAGAAAAACGGAGAGAATATGTCTGCAAGGTTTACCCTTCTTGCTTGGTAAATATTGAGAGGGATTACCTCTCAATCGATAAGCGGTATCCCCGACTCTTCATCTCTCCCGAATTCTCCAAGGCTGTTGTGAACTGGCCAAAGGAAAACCTTAAACTCTCTATACACACTCCTGTCAGTTTTGAGCATGATTTTGTTGAAGAAGAAAGTGCCAGAGGCACTTCTGGCAAGCTTTTGTCGGGACAACCTACAAGTTCAGAACAAGGAAATACAGTTTGGAATGCCAAAGTAATTTTGATGAGTGGGCTTAGTAGAGGTGCATTGGAGGAGCTGTCATCTGATAAAATTGTTGATGACCGCATTCCTCATATTTGCAATTTCCTTAGGTTTGCAATCCTTAAGAAGGATCATTCTTTCATGGCAGTTGGCGGTCCATGGGAACCTGCTGACGGGGGTGATCCATCTAATGATGATAACTCTTTGATCAGAACAGCCCTTAGATACTCTAAGGATATTAGTCAGCTTGATTTGCAAAAATGTCAACACTGGAACCGATTCCTTGAGATACATTATGATAGAATTGGTAAAGACGGTTTCTTTAGCCACAAGGAGATTACTGTACTATATGTTCCCGATTTGTCTGACTGCCTCCCTTCATTGGATGAATGGCGTGATCAGTGGCTCGCCCACAAGAAAGCTGTGGCTGAAAGAGAACGTCAAATTTCTCTAAACAAAGAGAAATCAAGGGCTAACAAGGAATCAAATGGTAAGAGGAAAGAATCTTCTGCATCTGGAAAATCTGATGTTAAGAAAAAAGAGAAAGATAACAGTGCTGTTAAGGATGTAAGTGAAAAAAAAGCTGGACTGAGCAACAGTAAAACTGCTAAGAATGATGCCTCGGCCATAGGTGATGGTAAGGGTGCAGAGAAAAAGCCAGGGGAAACTACCCCCGGTCAAACCACAGGAAGTGTTAAGCCTGTGAAGAAGAAAATTATAAAGAAGATTGTGAAGAAAGTTGTCAATAAGACAAACGATACTGCCAAGAGACAAACTGACAAGCCAGATGACAAGGATGTTGCAGATAAAGTGGCTACATCAGATGTGCCTGTTGAGGAGGTCAAGTCTTCTGTGGGTCCTACTGGGATTCTAACTTCTGGGGAAGGTATTGTTGCGGAGGATATTCCTGTTGGTAAAAATGATAAGGAAATAAACAGTTTTGAAGATAAGCCTCTGGACAAGCTGGATACAGCAGTTAACACAGGCACCGATGATTCTACTGTGAAGACAATAAAAAAGAAGAAAATTATCAAGCGGGTACCTAAAAAGAAGGTGGTTGATGAGGCATCTAAATCTGTAGTAAATGAAGGAAATGTTGTGGCAGCTCAGGCACAGGATGATACCAACAACACTGACAAGCAGACTGCTGATGCCAACACCATAGTGACTGAGGGCAAAAAACCTGTGAAAGTAGTAGCCAAAAGAAAGTTAAAAGCACCGACTTCTGGGGTACAAGATGATGCAACTGATTCCAATAAAAAAGACCCGAAGTCTGATAAAAAGGATGAAGAGAATGCAAATGACGACACACAGAGCACTAGCAAGAAGGCTACTGATGCAGATACAAAAACTGTGCCGGTGACAAAGAAAATTGTCAAGGTAGTTCCTAAGAAAAAGTTAAAGCCAACAACCTCTGAAAAGCAAGAAGCTTCAGGCGATTCCAATAAAAATGAAGTGAAGTCTGACAAAGATGACAATAAGGATGGAAAAGGAACTGGAGAAAAAAGTGGATCCAAAACTGGAGAAAAAAGTGGATCCAAGATAGATAAACAGAGTGCCTCTGAGAAAGATACTCCAATTGTCAAGGGGAAACTGAAAGTTGGGGATAAATCAAAAGATGAGAAAGTAACAAAAGAGAAAGATGAGCCTAAAAGCAAATCGGGTAAAGAAGGGAAAGAGAAGAAGAAATCTGATGAACCTCCTCGGCACCCCGGATTTATACTTAAAACAAAATCGACCAAAGATTCTAAACTACGATCATTGTCACTGTCTCTGGATTCATTGTTGGATTATTCTGACAAAGATGTTGAAGAATCAACAATTGAGCTTTCATTGTTTGCTGAATCATTTTATGAAATGCTTCAGTTTCAAATGGGTAGTAGGATTTTGACTTTTCTTCAGAAACTGCGTGAAAAATTCGTCACCAAAAGAGCTCAGCGAAAGAGGCAGCGGGAAGAGGAGGATAGTGCAAAAACGTCTCCCACAAAACGTCAAAAAGGTGATGATCCTTCTGTTAAGATTGAGACAAATACAGAAACATCAAATCCAACTCCAGCAGATAACGAGAAAGCTGTTGCCGAGAATGATAATTCTAGCAATAAGGAGGAGGATGTGAAGATGGAAAATGCATCCGATGAGGAAGATCCAGAAGAAGAGGATCCGGAAGAATATGAGGAAATGGAAAGTGGTAGTCCCCAACAGGACTCATCTGATGATAAAAATGCTGAGCTAGAGGCTGATGCAAAGAATGAATCTGAAAATGTTACTAGCAAGGAGAAAGCAGCTGATGAAACTTCTAAAGGAGAAATAAAGGTTAAAGACGAGGTGAAGGAGTCCAAGGATGATGTTCAACTCAATGAAGAAAAGGAAAGCAAGGTTGATAAAATTAAGAAAGATGCCCCTGCTGTTAAAGAGGCTGTTGTGGACAAAGAATTGTTGAAGGCTTTTCGATTTTTCGATCGGAATCGTGTTGGCTACGTTAGGGTTGAAGATATGCGAATAATAATCCACAATCTGGGGATGTTCCTTTCTCACAGGGATGTGAAGGAGCTTGTACAGAGTGCATTGCTGGAGAGCAACACTGGAAGGGACGATCGAATACTTTATATCAAGTTGGTGCGGATGAGCGACATTTGA 4242 0.4333 MYSSRGSGAYGQAYTGQSGYGQNLSTNYSGASVGGHDAAQHSAASRHSGILGSSQEADVGNYRAHTAVAQYGGQYSSVYGSAALSTAPQVPSLGTKGAASSALDARGGYSLGVSDSPKFASGDYVPSSSHGYGHKSDQLYGDKSLDYSGLDRRQYGERPSGYVGRDLPSDQTGRYSTDAVGYNHPHQGTLLRQEQLLKSHSLQAASLDGGARQTDYLTARAAASRHPTQDLMSYGGRIDSDPHASSMLSATSYSGQHAPSILGAAPRRNVDDLLYSQNASNPGYGVSLPPGRDYASGKGIHGNAMDLDYPGNLLPHGGPTDRKDDRASYLREFELREDERRRDRLRDRDRDRERDKERERLREREREREKEREKERMLERREKERERERKRALEVRPERTPVRSSKDPRSTSKDPRGSSLTKEGKSSRRDSPHRALHRHRSPVKEKRREYVCKVYPSCLVNIERDYLSIDKRYPRLFISPEFSKAVVNWPKENLKLSIHTPVSFEHDFVEEESARGTSGKLLSGQPTSSEQGNTVWNAKVILMSGLSRGALEELSSDKIVDDRIPHICNFLRFAILKKDHSFMAVGGPWEPADGGDPSNDDNSLIRTALRYSKDISQLDLQKCQHWNRFLEIHYDRIGKDGFFSHKEITVLYVPDLSDCLPSLDEWRDQWLAHKKAVAERERQISLNKEKSRANKESNGKRKESSASGKSDVKKKEKDNSAVKDVSEKKAGLSNSKTAKNDASAIGDGKGAEKKPGETTPGQTTGSVKPVKKKIIKKIVKKVVNKTNDTAKRQTDKPDDKDVADKVATSDVPVEEVKSSVGPTGILTSGEGIVAEDIPVGKNDKEINSFEDKPLDKLDTAVNTGTDDSTVKTIKKKKIIKRVPKKKVVDEASKSVVNEGNVVAAQAQDDTNNTDKQTADANTIVTEGKKPVKVVAKRKLKAPTSGVQDDATDSNKKDPKSDKKDEENANDDTQSTSKKATDADTKTVPVTKKIVKVVPKKKLKPTTSEKQEASGDSNKNEVKSDKDDNKDGKGTGEKSGSKTGEKSGSKIDKQSASEKDTPIVKGKLKVGDKSKDEKVTKEKDEPKSKSGKEGKEKKKSDEPPRHPGFILKTKSTKDSKLRSLSLSLDSLLDYSDKDVEESTIELSLFAESFYEMLQFQMGSRILTFLQKLREKFVTKRAQRKRQREEEDSAKTSPTKRQKGDDPSVKIETNTETSNPTPADNEKAVAENDNSSNKEEDVKMENASDEEDPEEEDPEEYEEMESGSPQQDSSDDKNAELEADAKNESENVTSKEKAADETSKGEIKVKDEVKESKDDVQLNEEKESKVDKIKKDAPAVKEAVVDKELLKAFRFFDRNRVGYVRVEDMRIIIHNLGMFLSHRDVKELVQSALLESNTGRDDRILYIKLVRMSDI* 1414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g2642 1413 Pfam LAIKA domain 1103 1168 IPR045353 -
Psa2g2642 1413 SMART DBC1_2 564 689 IPR025954 -
Psa2g2642 1413 Pfam BURAN domain 463 545 IPR045354 -
Psa2g2642 1413 MobiDBLite consensus disorder prediction 950 978 - -
Psa2g2642 1413 ProSiteProfiles EF-hand calcium-binding domain profile. 1342 1377 IPR002048 GO:0005509
Psa2g2642 1413 PANTHER CELL DIVISION CYCLE AND APOPTOSIS REGULATOR PROTEIN 948 1412 IPR025224 GO:0006355
Psa2g2642 1413 PANTHER CELL DIVISION CYCLE AND APOPTOSIS REGULATOR PROTEIN 1 921 IPR025224 GO:0006355
Psa2g2642 1413 MobiDBLite consensus disorder prediction 1176 1320 - -
Psa2g2642 1413 MobiDBLite consensus disorder prediction 1209 1228 - -
Psa2g2642 1413 MobiDBLite consensus disorder prediction 32 54 - -
Psa2g2642 1413 SUPERFAMILY EF-hand 1345 1390 IPR011992 -
Psa2g2642 1413 MobiDBLite consensus disorder prediction 781 811 - -
Psa2g2642 1413 Coils Coil 1168 1188 - -
Psa2g2642 1413 MobiDBLite consensus disorder prediction 1243 1264 - -
Psa2g2642 1413 MobiDBLite consensus disorder prediction 340 430 - -
Psa2g2642 1413 MobiDBLite consensus disorder prediction 1176 1208 - -
Psa2g2642 1413 Coils Coil 354 391 - -
Psa2g2642 1413 Coils Coil 1276 1296 - -
Psa2g2642 1413 MobiDBLite consensus disorder prediction 898 923 - -
Psa2g2642 1413 MobiDBLite consensus disorder prediction 897 1116 - -
Psa2g2642 1413 MobiDBLite consensus disorder prediction 678 725 - -
Psa2g2642 1413 Gene3D - 1344 1409 - -
Psa2g2642 1413 MobiDBLite consensus disorder prediction 340 443 - -
Psa2g2642 1413 Pfam DBC1 566 683 IPR025954 -
Psa2g2642 1413 PANTHER CCAR1 HOMOLOG 1 921 - -
Psa2g2642 1413 PANTHER CCAR1 HOMOLOG 948 1412 - -
Psa2g2642 1413 MobiDBLite consensus disorder prediction 678 822 - -
Psa2g2642 1413 MobiDBLite consensus disorder prediction 1273 1320 - -
Psa2g2642 1413 MobiDBLite consensus disorder prediction 1001 1116 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g2642 392 685 EF-hand Containing Proteins AT2G03150 60.131 1.16e-113 388
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g2642 K25827 - gmx:100784665 1243.41
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa2g2642 2 302797165 302806635 Psa2g2642 2 302797165 302806635 ECH