Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g2638 ATGACATTTAAGAAAGATTTCAAACAACAAATGGTGCCTGAATGGGAGAAACACTACATGGACTATCAAGGCCTCAAGACAATATTGAAAGAAATCAAAAGCAGCAACAAAGTTAAAGACAATAATAACCACTTGCATCATGGTAGCAATAATCAAGGAAATGAAGGTATTGAAGACAAGATTATAGATGTTAAGACATTAGAGAATGATGTTGATGGTTCCAAAAAAATTCATGAGACTAACTTGAATGAAGAAAAAGGTGAAGCTGATGCAAGGTTTTTTGAGAAGCTTGATGAAGAGCTTAACAAGGTTAATGTGTTTTATAAAGAAGAGGTGGAGGCAGTTCAGCATGAAGCAACACTTTTGAGTAAACAAGTTGAGACTTTAGTTGCTTTGAGAGTAAAGGTTAAAACCCCCAATCCAGGACTGCAGCAGGAAGACTCTATGGTGAGCACTGAAGTGGATCATGTAGAACAGACCAATAGAAGTACTCGTCATGAGGACGGAGCATCGAGTAATTATGAAAGAAGAGACCCAAAGGAAATCCTTGAGAATGTAAAGATTGATAATGCTCTTCAATCTCCAATATCATCAATCAAAAATGTTTTTACAGATTCCAATGATAGTGAGTTAAGTTTCAATGAAGAAGAGCTGAGAAAAGTTGAAAAACAACTTAGACTTGTGTTTGTTGAGTTCTATCAGAAACTTCTCCATCTCAAAGATTACAGTTTTATGAATCTCTCAGCATTTTCCAAGATCATGAACAAGTATGAAAAGAGTGCACCAAGAGGATCTTCAACAGCATATATGAGAGTAGTGGACAACTCTTATCTTGGTACTTCTGATGAGGTGAATTTTCTTCTGGAGAAAGTGGAATCTACCTTCATCAGAAACTTCACGCATTCAAATCACAAGAAAGGAAGGAAATTGCTAAGGCCAAAAAACAAAAGAGAAAGGCACAGCATAACATTTTTTACCGGCTTCTTTTCTGGTTGCTTTGTTGCTCTACTAGTTGCTACAATACTAAGAATAATATCTCAACATTTAATGAAGAAAAAAGCAGGAACATTTTACATGGAAAATATTTTCCCATTATACAGTCTATTTGGATATATCACTCTACATATGCTAATGTATGCTGCAAACACGTACTTTTGGAGGCGATATCGGATCAACTATCCGTTCTTGTTCGGTATTAGACATGGAACTGAGTTGGATCATAAAGATGTATTCCTTCTCACAGCTGGGCATGCAGTGATTGCAGTACTTTGTTTCTTGATAAATTTGCAGCTTGAGATGAATCAGACGGATAGAAGCTATAAAACGGCCACTGAACTTGTTCCTCTGAGCTTAATCGTCCTTGCCATTTTGATCACCTTTTGCCCTTTCAATATCATATACCGATCAAGTCGTTTCTTCTTTATCCGATCTTTATTCCGCTGCATATGTGCTCCTCTTTTTCCGGTTTCACTTTCAGACTTTTTCTTGGCCGATCAACTTACCAGTCAGTTTCAATCCTTCAGAAGTTTTGTTCTTTACATATGCTATTACGGCCTTGGAGAACACTCAAGGAGGCAAAACAAATGTAGAAGTCACGGTATCTATAATGTCCTATACTTCACGGTCGGCATCATTCCTTATTGGTTTCGCTTGGCACAGTGTATGCGTCAATTGTACGACGAGAGAGATATCGACCACGCGATCAACGGTTCGAAGTATCTATCAACAATTGTTGCAATGGTGATCAGGACTACCTTTGAAACAAAGAAGGGAATGAGATGGAAAGTGTTGGCACTTATAAGTTCAGGTGTAGCAATATCAATGAACACATATTGGGACATTGTGAAGGATTGGAGTCTCTTGCAGAGACATTCGAAGAATCGTTATTTGAGGGATAAACTCATAGTTTCTCACAAAAGTGTCTACTACATAGCCATGGTTGTGAACGTTGTTCTAAGACTTTCATGGATGCAGTTGGTGCTTGAATTGGATTGGCGCCCCCTTCATAAAGTGGCGATTAGTACATTTATTTCGTGTCTGGAAATTATTCGCCGCGGCATATGGAACTTCTTTAGGTTGGAGAATGAGCAGTTGAACAATGTTGGAAACTACCGCGCATTCAAGTCAGTTCCTCATCCTTTCAGTTACAATGATGATGATGACAACGACGACAAGAATGAATAA 2184 0.3805 MTFKKDFKQQMVPEWEKHYMDYQGLKTILKEIKSSNKVKDNNNHLHHGSNNQGNEGIEDKIIDVKTLENDVDGSKKIHETNLNEEKGEADARFFEKLDEELNKVNVFYKEEVEAVQHEATLLSKQVETLVALRVKVKTPNPGLQQEDSMVSTEVDHVEQTNRSTRHEDGASSNYERRDPKEILENVKIDNALQSPISSIKNVFTDSNDSELSFNEEELRKVEKQLRLVFVEFYQKLLHLKDYSFMNLSAFSKIMNKYEKSAPRGSSTAYMRVVDNSYLGTSDEVNFLLEKVESTFIRNFTHSNHKKGRKLLRPKNKRERHSITFFTGFFSGCFVALLVATILRIISQHLMKKKAGTFYMENIFPLYSLFGYITLHMLMYAANTYFWRRYRINYPFLFGIRHGTELDHKDVFLLTAGHAVIAVLCFLINLQLEMNQTDRSYKTATELVPLSLIVLAILITFCPFNIIYRSSRFFFIRSLFRCICAPLFPVSLSDFFLADQLTSQFQSFRSFVLYICYYGLGEHSRRQNKCRSHGIYNVLYFTVGIIPYWFRLAQCMRQLYDERDIDHAINGSKYLSTIVAMVIRTTFETKKGMRWKVLALISSGVAISMNTYWDIVKDWSLLQRHSKNRYLRDKLIVSHKSVYYIAMVVNVVLRLSWMQLVLELDWRPLHKVAISTFISCLEIIRRGIWNFFRLENEQLNNVGNYRAFKSVPHPFSYNDDDDNDDKNE* 728
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g2638 727 ProSiteProfiles EXS domain profile. 530 724 IPR004342 GO:0016021
Psa2g2638 727 PANTHER XENOTROPIC AND POLYTROPIC RETROVIRUS RECEPTOR 1-RELATED 1 725 - -
Psa2g2638 727 MobiDBLite consensus disorder prediction 158 180 - -
Psa2g2638 727 MobiDBLite consensus disorder prediction 142 180 - -
Psa2g2638 727 ProSiteProfiles SPX domain profile. 1 271 IPR004331 -
Psa2g2638 727 MobiDBLite consensus disorder prediction 142 157 - -
Psa2g2638 727 MobiDBLite consensus disorder prediction 37 57 - -
Psa2g2638 727 PANTHER PHOSPHATE TRANSPORTER PHO1 HOMOLOG 10 1 725 - -
Psa2g2638 727 Pfam EXS family 363 697 IPR004342 GO:0016021
Psa2g2638 727 Pfam SPX domain 42 272 IPR004331 -
Psa2g2638 727 Pfam SPX domain 1 43 IPR004331 -
Psa2g2638 727 CDD SPX_PHO1_like 3 267 IPR034092 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g2638 Psa-Chr2 302666803 302670747 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g2638 - - mtr:MTR_5g042150 1198.34
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa2g2638 2 302666803 302670747 Psa2g2638 2 302666803 302670747 ECH