Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g2604 ATGTCCTCGAGACGCCACTCGCTGAGTGGTCCTCCCCAACTCAGTGGTACCGCTTCGACTCACGAGCTCCGGCAACGAGTCATTACCTGTCTCAACAAACTCTCCGACCGCGACACTCTCGCCGGAGCTACTGTAGAGCTTGAATCCATTGCTAGAACCCTAAGTCATGACTCTTTCTCATCTTTTCTCTCTTGCATTCATAACACTGATTCGTCTTCTAAATCTCCGGTTCGTAAACAATGTGTTAACCTTTTGAGCCTTCTCTCGCGTTTCCATGGTGACGCTCTATCTCCTTTTCTTTCGAAGATGATTGCTACTGTCCTCCGTCGTCTGAGAGATCCCGACTCCGTCGTAAGATCCGCTTGCGTCGACGCTGTTGCGGAGATGTCGTCGCGCATCACTCGACCTTCGTTCTCCGTTGCTTTCCTGAGGCCGTTCATGGACGCATTAGCGTTGGAGCAGGACGTGAATGTGCAGATCGGCGCCTCACTTTGCCTCGCCGCGGCTATTGATGCAGCGCCGGAGCCGGACGTTGAGTCGCTCCGGAGGACTACGCTTCCAAGGCTAGGGAAGCTTCTGAAGACGGACTCGTGTAAGGCGAAGGCGCCGTTGTTGGTGCTGATCGGAAGCGTTGTATCTGTCGGTGGTGCTTCGAGTCGCGGGACAATGAATTGGTTGGCTCCGTGCCTTGTCGAGTTTCTCGGTAGTGAGGATTGGACTGTGAGAAAAGCCTCTGCGGAGACATTGGGGAAAGTAGCTTCAGTGGAGAAAGATTTGGGGTCGCAGCATAAAGTTCTGTGTCTGGATTCGTTGCAAAATAAACGGTTTGATAAGGTCAAAGTTGTTCGAGAGACTATGAATCTGGCATTGGATATGTGGAAGAAAGTAAAAGATGTGTCTGAAAATGCTCCTACTCCGGTTAAGTCTGCATGTGTTTCAGCTGGCACAGAAGATGGTAAAGGTCTATGTGCAACCAAAAGTTCACCCTTAGTTGGCTCTAAATTGTCCCAACTAAATAAAATGGTCTCTTCAAAAAGGTCACCTACATCTACAGTTTCATTTAAATCCTCTGGCAAAAGAGAGATTCCTATAAAGAGTAATGACAAGTATTCAAGAATGGGGATGTTGCGCCAGCAAGATCATGAGAAATTATCTGATGAAAAACTTCAAACTCCAGTATTGAAGTCCTCCCATTCAAACATGACCAAGGAAGATGATATTAAAAGGTGTGATTTTGAATCTTCTAAGTCACCCACATATCAGAATGCGACAAATTCGAGGGTTGATGTAAGTCGAGTTTTCCTTAACAAGATGTCAGATGAGAAAATGCGGAAGCTTGGTGGTTCAAACTCTCGTGTAGTTCCATGTGATGATGATGATGATGATCTCGACACAGATGTTACTGTCAACAATGTTAATGAAGTTTGTGAGAGCCCACAAGATGTTGAGGATTTGTCTTTGATACGGGAACAACTTTTACAAATAGAAAACCAGCAATCAAATTTGTTAGACCTCCTCCAGAGATTTATTGGAACCTCCCAAACTGGGATGAATTCTCTGGAGACACGTGTACATGGTCTAGAAATGGCATTGGATGAAATATCATATGATTTAGCAGTATCAAGTGGCAGGATTCCCAACACTGATGCCATAGAAGACATGTGTTGCAAGCTACCTGGTACTGACTTTCTGAGTTCTAAATTCTGGAAGAAGACAGAAGGTCGGTACTCGACGTCAAGGTTCTCTTTTGGAAGCTCAGCACCAATAAATAATGTGCATAATGCAACTGATAGAAATGGAAGCAAAGAAATATTAAGTACAAATAGCAAAAGATTTCAGCTTCGAAGGGATGAGGGTGGATATCTTGTGAACCCATTGCCAGAAATTCAAAGCGATTTGAAGGGTCATTCAGGGCAACTATCGTATAAATTCTCTAAAAACTTTGTTCAAGATGCTGGGAGTGCACAAAGTAACAGTTCCAGCAGATTTGAAGGCATTTCATCAACTAGGGAAATACTGAGGAACCAGAATATCAGGTAA 2040 0.448 MSSRRHSLSGPPQLSGTASTHELRQRVITCLNKLSDRDTLAGATVELESIARTLSHDSFSSFLSCIHNTDSSSKSPVRKQCVNLLSLLSRFHGDALSPFLSKMIATVLRRLRDPDSVVRSACVDAVAEMSSRITRPSFSVAFLRPFMDALALEQDVNVQIGASLCLAAAIDAAPEPDVESLRRTTLPRLGKLLKTDSCKAKAPLLVLIGSVVSVGGASSRGTMNWLAPCLVEFLGSEDWTVRKASAETLGKVASVEKDLGSQHKVLCLDSLQNKRFDKVKVVRETMNLALDMWKKVKDVSENAPTPVKSACVSAGTEDGKGLCATKSSPLVGSKLSQLNKMVSSKRSPTSTVSFKSSGKREIPIKSNDKYSRMGMLRQQDHEKLSDEKLQTPVLKSSHSNMTKEDDIKRCDFESSKSPTYQNATNSRVDVSRVFLNKMSDEKMRKLGGSNSRVVPCDDDDDDLDTDVTVNNVNEVCESPQDVEDLSLIREQLLQIENQQSNLLDLLQRFIGTSQTGMNSLETRVHGLEMALDEISYDLAVSSGRIPNTDAIEDMCCKLPGTDFLSSKFWKKTEGRYSTSRFSFGSSAPINNVHNATDRNGSKEILSTNSKRFQLRRDEGGYLVNPLPEIQSDLKGHSGQLSYKFSKNFVQDAGSAQSNSSSRFEGISSTREILRNQNIR* 680
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g2604 679 SUPERFAMILY ARM repeat 23 291 IPR016024 -
Psa2g2604 679 MobiDBLite consensus disorder prediction 341 357 - -
Psa2g2604 679 Pfam HEAT repeat associated with sister chromatid cohesion 101 126 IPR026003 -
Psa2g2604 679 Coils Coil 488 508 - -
Psa2g2604 679 MobiDBLite consensus disorder prediction 1 21 - -
Psa2g2604 679 Gene3D - 13 358 IPR011989 -
Psa2g2604 679 PANTHER MICROTUBULE-ASSOCIATED PROTEIN TORTIFOLIA1 3 669 IPR033337 GO:0005874|GO:0008017
Psa2g2604 679 MobiDBLite consensus disorder prediction 341 360 - -
Psa2g2604 679 Pfam HEAT repeat 227 255 IPR000357 GO:0005515
Psa2g2604 679 PANTHER TORTIFOLIA1-LIKE PROTEIN 4 3 669 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g2604 Psa-Chr2 300161652 300164797 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g2604 - - mtr:MTR_5g036950 1032.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa2g2604 2 300161652 300164797 Psa2g2604 2 300161652 300164797 ECH