Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g2598 ATGTCCATCACCACCAACACCCAACTTATCCTCTCATTTCTTCAACCTCGCCACCACTCTTTCTCTCTCCTCCCAACTCCAATTGCTTTCTCATTTTCTCTCCTCCGACATCGTTCCTTCTCTCATTCTCTCAAATTCTCCTTCAAGTCCCCAACCTCACCTATCCGCACCTTCAATGCCGACGAGGACGATGACGAAGAAGACGAAGAAGAAGATGAAGACGACGAAGAAGACGTTGCTGCTGATGAATACGACGACGTTGTATCCGGTGAGGTTTCCGACGAAGGCGAAACGTTTGAAGTCGATGAATTGACTCGTCGCGATGACGGATTCAAGTGGCAGAGAGTTGAGAAGCTTTGTAATGAAGTGAGAGAGTTCGGTGTTGGGATTATTGACCTTGATGAACTTGCTTCCGTTTATGATTTCCGAATCGATAAGTTCCAGCGGCAAGCGATTCAAGCTTTTCTGAGAGGTTCTTCGGTGGTGGTTTCTGCTCCGACGAGTAGTGGGAAGACTTTGATTGCGGATGCTGCGGCGGTTGCTACAGTGGCTAGAGGTCGGAGATTGTTCTACACGACTCCTCTTAAAGCGTTGTCTAATCAGAAGTTTCGCGAATTCCGGGAAACTTTTGGCGATAGCAATGTTGGCCTTCTTACCGGTGATTCTGCTGTCAACAAGGATGCTCAGGTTTTGATTATGACTACAGAGATATTACGCAACATGCTGTATCAAAGTGTTGGTAATGTTTCTTCTGGAAGTGGACTTGTCAATGTTGATGTGATTGTTTTGGATGAAGTTCATTACCTTAGTGACATATCTCGCGGTACAGTTTGGGAGGAAATTGTTATTTATTGCCCAAAAGAAGTTCAACTTATTTGTCTCTCAGCAACAGTTGCAAATCCAGATGAGTTGGCTGGTTGGATTGGTCAGATTCATGGTGGAACAGAATTGGTAACATCGTTGAAACGCCCAGTTCCTCTTACTTGGCATTTCTCTTTGAAGAATTCCTTATTACCACTTCTTGATGAGAAAGGAACACAGATGAACAGGAAACTGTCACTCAATTATTTACAACTTCAAGCTGCAGGAGCTAAACCTTACAAGGATGATTGGCCTAGAAAAAGGAATTCCCGGAAACGTGCAACTCACACAAGCTATGATAATGATGATAGCATGTTGGAACAACGTTCTCTTTCAAAGAATGACATAAATGCGATCCGTCGATCACAAGTTCCTCAAATAATCGATACATTATGCCACCTTCAGTCTAGGGATATGCTTCCAGCTGTTTGGTTTATTTTTAGCAGAAAAGGTTGTGATGCAGCTGTGCAATATGTTGAAGATTTCAAACTTTTAGATGAGTGTGAAGCAAGTGAGGTTCAACTAGCTTTGAAGAAGTTCCGCATTCAGTATCCTGACGCTGTCAGAGATACAGCTTTGAAAGGACTTTTGCAAGGAGTTGCTGCGCATCATGCTGGATGTCTACCTCTGTGGAAAGCTTTCATAGAAGAATTGTTTCAAAAAGGACTTGTTAAGGTTGTTTTCGCTACGGAAACCCTGGCTGCCGGAATCAATATGCCTGCTAGAACAGCTGTTATTGCATCTCTCAGCAAAAGAAGTGATAATGGGCGCACCCTATTGACCTCAAATGAACTGCTTCAGATGGCCGGGCGTGCTGGACGTAGAGGCATTGATGAAAGGGGTCATGTAGTCCTCGTCCAAACTCCTAATGAAGGTGCTGAAGAGTGCTGCAAGGTACTTTTTTCTAGACTTGAGCCTCTGGTGTCGCAGTTTACTGCTTCATATGGAATGGTTTTGAATCTTCTTGGTGGTGGGAAAGCCATTCGTAGGTCAAACATATTAGAGACAAAACCTTCCTCAGGGAAAACTTTGGATGAAGCTAGGAAGTTAATCGAGCAAAGTTTTGGAAATTATGTTAGTAGCAGTGTTATGCTGGCTGCTAAAGAGGAAATTAATAAAATTAAAAAAGAAATTGAGTTGCTAATGTCAGAAATCACTGATGAGGCCATAGATAGAAAAAGCAGGAAGGCTTTACCACAGCCACAATACAAGGAGATTGCAGAATTACAAGGAAATTTAAGAGCAGAGAAACGTGTTCGGACTGAATTGCGAAAACAGAAAGAAGCAGCAAGAATATCTGCCTTGAAACTTTTGTTTGAAGAGTCTGAAAATGGACATTTACCATTTTTGTGTTTGCAGTATAGAGATTCTGAAGGAGTTCAACATTCAATTCCTGCTGTATTTTTGGGGAAGGTTAACTCCGTCGGTGCTTCAAAACTAAAAAACATGATACGTTCTGTGGATTCTTTTGCATTAAATTCAGCTGATGCAGATTCTGAATTGAAAGAAGACCCCGTACCATCATATCACGTAGCTCTTGGTTCAGATAACTCTTGGTATCTATTTACAGAAAAATGGATTAAAACAGTTTATGAGACAGGACTTCCTGATGTTCCATTAGTCGAAGGAGATACCCGACCTCGTGAAATTATGAGTGATCTCCTTGATAAGGAGGACATGAAGTGGGATAACCTTGCCAACTCTGAACATGGTGGTTTATGGTTCACGGAGGGATCTCTTGAAACATGGTCTTGGAGTTTAAATGTTCCTGTTTTGAGTAGCTTCTCTGAAAATGATGAGCTGCTACTGAAGTCTCAAGCATTCAGAGATGCAGCTGAACAATACAGGGAGCAAAAACATAAAGTTGCACGCTTGAAAAAAAAGATAAATCGTACCGAAGGCTATAAAGAATATAGTAAAATCCTAGACGCAGCCAAGTTTATCGAGGAGAAAATCAAGCGAATGAAGACTAGATCCAAACGTTTGACTAATCGTATAGAACAAATTGAACCCTCAGGTTGGAAGGAGTTTATGCAGGTTAGCAATGTCATACGTGAGACCAGAGCTTTAGATATTAACACACATGTCATATTTCCACTGGGAGAAACTGCTTCAGCGATCCGTGGAGAAAATGAGCTCTGGCTTGCAATGGTTCTTCGCAGTAAAATTTTACTAGAACTAAAACCTACACAACTTGCTGGAGTGTGTGCAGGTTTGGTGTCAGAAGGTATCAAAGTCAGACCCCGGAAGAACAACAATTACATTTATGAGCCTTCTGCAACTGTTGTCAATGTCATACGGTTATTGGATGACCAAAGGAGTGCCTTATTGGCAATTCAGGAGAAGCATGGGGTGACAATATCTTGCTGTTTGGATAGCCAATTTTGTGGTATGGTTGAAGCATGGGCTTCAGGGTTGACATGGAGAGAAATAATGATGGATTGTGCAGTGGATGATGGTGATCTAGCTCGTCTTCTTCGACGGACCATTGATTTATTAGCTCAGATTCCTAAATTGCCAGATATTGATCCATTGTTGAAGCGGAATGCAAGGGCTGCTTCTGATATATTGGACCGGCCTCCAATAAGTGAACTTGCTGGGTAG 3465 0.4214 MSITTNTQLILSFLQPRHHSFSLLPTPIAFSFSLLRHRSFSHSLKFSFKSPTSPIRTFNADEDDDEEDEEEDEDDEEDVAADEYDDVVSGEVSDEGETFEVDELTRRDDGFKWQRVEKLCNEVREFGVGIIDLDELASVYDFRIDKFQRQAIQAFLRGSSVVVSAPTSSGKTLIADAAAVATVARGRRLFYTTPLKALSNQKFREFRETFGDSNVGLLTGDSAVNKDAQVLIMTTEILRNMLYQSVGNVSSGSGLVNVDVIVLDEVHYLSDISRGTVWEEIVIYCPKEVQLICLSATVANPDELAGWIGQIHGGTELVTSLKRPVPLTWHFSLKNSLLPLLDEKGTQMNRKLSLNYLQLQAAGAKPYKDDWPRKRNSRKRATHTSYDNDDSMLEQRSLSKNDINAIRRSQVPQIIDTLCHLQSRDMLPAVWFIFSRKGCDAAVQYVEDFKLLDECEASEVQLALKKFRIQYPDAVRDTALKGLLQGVAAHHAGCLPLWKAFIEELFQKGLVKVVFATETLAAGINMPARTAVIASLSKRSDNGRTLLTSNELLQMAGRAGRRGIDERGHVVLVQTPNEGAEECCKVLFSRLEPLVSQFTASYGMVLNLLGGGKAIRRSNILETKPSSGKTLDEARKLIEQSFGNYVSSSVMLAAKEEINKIKKEIELLMSEITDEAIDRKSRKALPQPQYKEIAELQGNLRAEKRVRTELRKQKEAARISALKLLFEESENGHLPFLCLQYRDSEGVQHSIPAVFLGKVNSVGASKLKNMIRSVDSFALNSADADSELKEDPVPSYHVALGSDNSWYLFTEKWIKTVYETGLPDVPLVEGDTRPREIMSDLLDKEDMKWDNLANSEHGGLWFTEGSLETWSWSLNVPVLSSFSENDELLLKSQAFRDAAEQYREQKHKVARLKKKINRTEGYKEYSKILDAAKFIEEKIKRMKTRSKRLTNRIEQIEPSGWKEFMQVSNVIRETRALDINTHVIFPLGETASAIRGENELWLAMVLRSKILLELKPTQLAGVCAGLVSEGIKVRPRKNNNYIYEPSATVVNVIRLLDDQRSALLAIQEKHGVTISCCLDSQFCGMVEAWASGLTWREIMMDCAVDDGDLARLLRRTIDLLAQIPKLPDIDPLLKRNARAASDILDRPPISELAG* 1155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g2598 1154 Gene3D - 932 1146 - -
Psa2g2598 1154 Pfam DEAD/DEAH box helicase 147 299 IPR011545 GO:0003676|GO:0005524
Psa2g2598 1154 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 410 609 IPR001650 -
Psa2g2598 1154 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 152 316 IPR014001 -
Psa2g2598 1154 PANTHER DEXH-BOX ATP-DEPENDENT RNA HELICASE DEXH15 CHLOROPLASTIC 43 1150 - -
Psa2g2598 1154 SMART ultradead3 140 330 IPR014001 -
Psa2g2598 1154 Coils Coil 693 713 - -
Psa2g2598 1154 SMART helicmild6 477 563 IPR001650 -
Psa2g2598 1154 PANTHER ATP-DEPENDENT RNA AND DNA HELICASE 43 1150 - -
Psa2g2598 1154 Pfam DSHCT (NUC185) domain 983 1149 IPR012961 -
Psa2g2598 1154 SMART DSHCT_2 979 1153 IPR012961 -
Psa2g2598 1154 MobiDBLite consensus disorder prediction 60 96 - -
Psa2g2598 1154 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 152 577 IPR027417 -
Psa2g2598 1154 Gene3D - 324 594 IPR027417 -
Psa2g2598 1154 Coils Coil 932 952 - -
Psa2g2598 1154 CDD SF2_C_Ski2 393 575 - -
Psa2g2598 1154 Gene3D - 105 323 IPR027417 -
Psa2g2598 1154 Coils Coil 651 671 - -
Psa2g2598 1154 MobiDBLite consensus disorder prediction 56 96 - -
Psa2g2598 1154 MobiDBLite consensus disorder prediction 367 388 - -
Psa2g2598 1154 Coils Coil 885 915 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g2598 Psa-Chr2 299663502 299675026 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g2598 K26077 - gmx:100780908 1771.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa2g2598 2 299663502 299675026 Psa2g2598 2 299663502 299675026 ECH