Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g2573 ATGTCTAATAATTCGAGGGGTCGAGTTACCATTACTCTTGGACGCAGCGGTCAGGTTGTGAAGAGGGACGTATCTGCGGCAGATGTTGCTTACTCTTCTTCTATGTCTTCAGCTGGGAGTAAGCGGTCTGTGAGAGACAGAATTGGAAATAATGCAGATAGTTCCATGTGGCATGGAAATGGGCTCGGCGGCAATAAAAGACAGCGAGGAGATGTAAGCATGCAAAATGGACTGGATGATCGGCGTATTGGAAAAGATGATCTCCGATTGAAACTCATGCAAAAAAGTGCATCAAGGAGGACTGAAAGTAATGGCAATAAGAGGAATATCGATCTCCGTGAAAAATTGTCGAAAACAGCTCATCCTCCGACGAACAGTTTTAATTCAAAGCAGCGCATGCCTGAACCAAGGGATGCAAGCTTGTACAGGCCAGTTCCATCAGCTAGAAGTTCTGATGATTTAATGCGTATGGAGTCCATGAGAAGCTCATACTCTCCTTGGACACTGGATCAAATTCGGCAAAGATCACCAGATGGGTTTCCAAGTTCTTCCAGGGGGATCTCCCCCCAAAGAAATGTTGGAGACCCTCAGAGAAGGCCTTTAAACAGGACATACGATGGAGTCAGACCAGTTTCATATGCAGGTAGGGATGTTCTTGAAACTTCAAGGCCTCCAAGTGCTGCTGCACCTTCATCTTTTATGTCAAGATCCGCAATATCGTCATTGCCTCCAGTAACTGCCAAACCTGTAGCATCTCGTCCTGGTCAGCATCCTCCATCAAGCAGCGTTGCACAAAGGGTTCCATTTGTGGGCGAGGAACAGCAACCACAAACTGTTGATGGCCTGTTGCAAGCATTGGGACTACAAAAATATGTCATACTCTTCAAGGCCGAGGAAGTGGATATGACCGCATTGAAGCAGATGGGAGAAAATGACCTCAAAGAGCTTGGAATTCCTATGGGTCCAAGGAAAAAACTTCTTCTTGCACTCTTGCCTCGTAAACGACAGCAGTGTTGA 1017 0.4631 MSNNSRGRVTITLGRSGQVVKRDVSAADVAYSSSMSSAGSKRSVRDRIGNNADSSMWHGNGLGGNKRQRGDVSMQNGLDDRRIGKDDLRLKLMQKSASRRTESNGNKRNIDLREKLSKTAHPPTNSFNSKQRMPEPRDASLYRPVPSARSSDDLMRMESMRSSYSPWTLDQIRQRSPDGFPSSSRGISPQRNVGDPQRRPLNRTYDGVRPVSYAGRDVLETSRPPSAAAPSSFMSRSAISSLPPVTAKPVASRPGQHPPSSSVAQRVPFVGEEQQPQTVDGLLQALGLQKYVILFKAEEVDMTALKQMGENDLKELGIPMGPRKKLLLALLPRKRQQC* 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g2573 338 Gene3D - 277 338 IPR013761 -
Psa2g2573 338 MobiDBLite consensus disorder prediction 176 197 - -
Psa2g2573 338 MobiDBLite consensus disorder prediction 176 234 - -
Psa2g2573 338 Pfam SAM domain (Sterile alpha motif) 275 330 IPR001660 GO:0005515
Psa2g2573 338 SUPERFAMILY SAM/Pointed domain 275 334 IPR013761 -
Psa2g2573 338 SMART SAM_4 271 336 IPR001660 GO:0005515
Psa2g2573 338 ProSiteProfiles SAM domain profile. 274 337 IPR001660 GO:0005515
Psa2g2573 338 PANTHER PA-PL1 PHOSPHOLIPASE FAMILY 1 335 - -
Psa2g2573 338 PANTHER OSJNBA0060P14.15 PROTEIN 1 335 - -
Psa2g2573 338 MobiDBLite consensus disorder prediction 119 133 - -
Psa2g2573 338 MobiDBLite consensus disorder prediction 73 118 - -
Psa2g2573 338 MobiDBLite consensus disorder prediction 244 263 - -
Psa2g2573 338 MobiDBLite consensus disorder prediction 52 156 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g2573 Psa-Chr2 295370612 295377019 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g2573 273 330 Glycosyltransferase AT3G07170 56.897 1.03e-15 72.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g2573 - - gmx:100797199 468.388
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa2g2573 2 295370612 295377019 Psa2g2573 2 295370612 295377019 ECH