Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g2447 ATCTAATTATTTTGACTTTCAGTTTCTTCAGTTGCACTTAGATCCAGCTAGTGGCAATACTCTCCCTGCTGCTGGAAATGGGTCCATCACGCAAACTTTGAAAGTTACTAATAGCCAACATGGAAAGAAATCTCTTGTAATGCGCATAAGGATAGCATACAAGGTAAATGGCAAGGATACACTGGAGGAAGGACAAATCAGTAATTTTCCTCGTGATTTATGA 223 0.3901 SNYFDFQFLQLHLDPASGNTLPAAGNGSITQTLKVTNSQHGKKSLVMRIRIAYKVNGKDTLEEGQISNFPRDL* 74
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g2447 73 SUPERFAMILY Clathrin adaptor appendage domain 8 72 IPR013041 -
Psa2g2447 73 PANTHER ADAPTIN, ALPHA/GAMMA/EPSILON 7 73 - -
Psa2g2447 73 Pfam Adaptin C-terminal domain 8 70 IPR008152 GO:0006886|GO:0016192
Psa2g2447 73 Gene3D - 7 72 - -
Psa2g2447 73 PANTHER AP-1 COMPLEX SUBUNIT GAMMA 7 73 - -
Psa2g2447 73 ProSiteProfiles Gamma-adaptin ear (GAE) domain profile. 1 70 IPR008153 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g2447 Psa-Chr2 279808578 279808981 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g2447 K12391 - pvy:116121328 126.716
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa2g2447 2 279808578 279808981 Psa2g2447 2 279808578 279808981 ECH