Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g2394 ATGCAACACCCACTCCGTTGTTATCTTCCCTCTATTCTATTCTATATTCATCCATCCACTCTTCTTCAACCTTCCTTTCTTTTCTTCCAGATCTCTCCCACCCTTTTCTTCATCATCTACCATTTCAATTTCAAGTTTTCAGTTGAGACTTATACACAATCAAGGATAATGTTTGGGGGAAACAACAATGTAAACCGGGTTCTTCCTGGTTTTGTAGATGAGACTCAGATTCAGTATCAAAATAATGCGGCAAATCAGTTGCAGTTGTTTGGAAATTTACAAGATGGATGCAGTGTTGATCTGGTTAACTTTGGAAATGAGCATATTGGTTCCATGACTCTGCCTAATAATAAGCGAAGCAGGGATTTGGGAGATATTTCAAATCAGCAAAGGCTTCAAATTTCCTTAAATTACAATGCCCGCCAAGATGAACTCGGCCGATCAGCAAGTATTCCAAACCCTAATCATGTGTCAACAGGATTGAGGCTTTCGTACGATGATGATGAGCGCAACTCAACCGTTACTTCTGCTAGTGGCAGCATAACTACCACACCTTCTATCATATTGTCTCTTGGTGATAATATCAGAACCGAGCTTGATCGGCAGCAAGAAGATTTGGACCAGTATATCAAACTTCAGAAGGAACAATTGTCGAAAGGAGTACAAGATATGAAGCAAAAACACATGACATCTCTTGTTACTTCAATTGAGAAAGGCATTGGTAAGAAGCTAAAAGAAAAAGATGTCGAAATCGAAAACATGAACCGTAAAAACAAGGAGCTAGTCGAGAGAATAAAGCAGGTCGTTGTCGACGCGCAAAATTGGCACTATAGAGCAAAGTATAACGAATCAGTTGTCAGCGTGTTGCGGAACAACCTTCAGCAGGCAATTTCGCATGGAGTTGAGCATGAACTAAAGGAAGGATTTGGAGACAGTGAAGTTGACGAAGCTTCCTCGTATATAGATCCTAATAACTTGTTGAACATTTCAGGCGCGCTTATGAAGCCTATTTACAAAAGCCACCAAGGAACGGAGAATCTTTATTGCAGAGCATGCAAAGAAAAAGAGGTTTGCATGTTGATGATGCCTTGTAGACACTTGTGCTTGTGTAAATATTGTGATGGATTTATCAATGTTTGTCCTGTATGCCAATTGGTAAAAACCGCAAGTTTCGAGGTTTATCTGTCTTAA 1191 0.3988 MQHPLRCYLPSILFYIHPSTLLQPSFLFFQISPTLFFIIYHFNFKFSVETYTQSRIMFGGNNNVNRVLPGFVDETQIQYQNNAANQLQLFGNLQDGCSVDLVNFGNEHIGSMTLPNNKRSRDLGDISNQQRLQISLNYNARQDELGRSASIPNPNHVSTGLRLSYDDDERNSTVTSASGSITTTPSIILSLGDNIRTELDRQQEDLDQYIKLQKEQLSKGVQDMKQKHMTSLVTSIEKGIGKKLKEKDVEIENMNRKNKELVERIKQVVVDAQNWHYRAKYNESVVSVLRNNLQQAISHGVEHELKEGFGDSEVDEASSYIDPNNLLNISGALMKPIYKSHQGTENLYCRACKEKEVCMLMMPCRHLCLCKYCDGFINVCPVCQLVKTASFEVYLS* 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g2394 396 PANTHER SBP (S-RIBONUCLEASE BINDING PROTEIN) FAMILY PROTEIN 61 395 IPR017066 -
Psa2g2394 396 ProSiteProfiles Zinc finger RING-type profile. 349 384 IPR001841 -
Psa2g2394 396 PANTHER S-RIBONUCLEASE BINDING PROTEIN SBP1-RELATED 61 395 - -
Psa2g2394 396 Coils Coil 244 271 - -
Psa2g2394 396 PIRSF SBP1_RNase_bind 57 396 IPR017066 -
Psa2g2394 396 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 337 396 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g2394 Psa-Chr2 274561395 274564850 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g2394 349 384 Miscellaneous Gene Families AT4G39050 41.667 5.10e-07 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g2394 K19042 - gmx:100791550 483.026
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa2g2394 2 274561395 274564850 Psa2g2394 2 274561395 274564850 ECH