Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g2386 ATGGGGTTAACATTCACGAAGCTTTTCAGTCGGTTATTTGCGAAGAAGGAAATGAGAATTTTGATGGTGGGTCTCGATGCTGCTGGTAAGACCACTATCCTCTACAAGCTCAAGCTGGGAGAGATTGTCACTACTATCCCTACCATTGGGTTCAATGTTGAGACTGTGGAATACAAGAACATTAGCTTCACTGTTTGGGATGTCGGAGGCCAGGACAAGATTCGTCCCTTGTGGAGGCACTACTTCCAGAACACTCAGGGTCTTATATTTGTTGTTGACAGCAATGACAGGGACAGAGTTGTTGAGGCCAGAGACGAGCTACATAGAATGTTGAATGAGGATGAACTGAGAGATGCAGTATTGCTTGTGTTTGCCAACAAACAAGATCTTCCCAATGCAATGAATGCTGCTGAGATTACTTTGGACAAGCTGGGTTCTCCACTCTCTCAGACAGCGCACTGGTACATTCAGAGCACTTGTGCAACCTCTGGGGAGGGTCTTTATGAAGGTTTGGACTGGCTTTCCAACATATAG 534 0.4569 MGLTFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITLDKLGSPLSQTAHWYIQSTCATSGEGLYEGLDWLSNI* 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g2386 177 SMART rab_sub_5 18 159 - -
Psa2g2386 177 CDD Arf1_5_like 18 176 IPR045872 GO:0003924
Psa2g2386 177 TIGRFAM small_GTP: small GTP-binding protein domain 16 136 IPR005225 GO:0005525
Psa2g2386 177 PANTHER ADP RIBOSYLATION FACTOR-RELATED 1 176 IPR024156 GO:0005525
Psa2g2386 177 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 14 176 IPR027417 -
Psa2g2386 177 PANTHER ADP-RIBOSYLATION FACTOR A1F 1 176 - -
Psa2g2386 177 SMART arf_sub_2 1 176 - -
Psa2g2386 177 ProSiteProfiles small GTPase Arf family profile. 11 177 - -
Psa2g2386 177 PRINTS GTP-binding SAR1 protein signature 19 42 IPR006689 GO:0003924|GO:0005525
Psa2g2386 177 PRINTS GTP-binding SAR1 protein signature 47 71 IPR006689 GO:0003924|GO:0005525
Psa2g2386 177 PRINTS GTP-binding SAR1 protein signature 74 99 IPR006689 GO:0003924|GO:0005525
Psa2g2386 177 PRINTS GTP-binding SAR1 protein signature 119 140 IPR006689 GO:0003924|GO:0005525
Psa2g2386 177 Gene3D - 4 177 IPR027417 -
Psa2g2386 177 SMART sar_sub_1 1 177 IPR006689 GO:0003924|GO:0005525
Psa2g2386 177 Pfam ADP-ribosylation factor family 5 176 IPR006689 GO:0003924|GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g2386 Psa-Chr2 273954293 273957998 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g2386 K07937 - han:110926001 333.954
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa2g2386 2 273954293 273957998 Psa2g2386 2 273954293 273957998 ECH