Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g2347 ATGGAATTCAGTAAATCCTTTTTGAATCATAAAGTAACTAAGTCCTCTCCTTCCCCTGCACTGTGTTGTGTGGAGACAGTGCCTAAAGATGAACAAAATTCTCATGTTACAGCTTTTAATTCAGGAGATGGATCTACCAATTCCTGTAATGAATCGTCTTCATCAACTACCATCCGCGATGTACATATATCAATGCGGTTAATGGAGGACTTTCTTGATCTTGCTAAAGAAAATACAGAAAAGGATCTTGAAACGTGCGGTATACTCGGTGCCTTTCTGGAGAAAGGAACCCTCTATATGACTACACTAATCATACCGAAGCAGGAATCAGCATCTAATTCTTGTAACGCTACAAATGAGGAGGAAGTTTTCACAATTTTCAATGAAAGATCCCTTTATCCTGTTGGATGGATCCATACGCACCCTTCTCAAAGTTGTTTCATGTCATCGGTGGATCTGCACACTCAATATTCCTACCAGGCGATGATTCCGGAGGCATTTGCAATTGTATTGGCACCAACTGATACGTCAAGGAGCTGTGGACTCTTTCGCATAACCGAACCTGATGGGATGAATATTCTAAAAAATTGTCCGGAGAGAGGATTTCATCCGCACAAAGAACCAGATAATGGGAACCCTGTGTATGAGCACTGCTCCAATGTGTACAAAAACTCCAATCTAAGGTTTGAAATATTTGATTTACGCTAA 708 0.4054 MEFSKSFLNHKVTKSSPSPALCCVETVPKDEQNSHVTAFNSGDGSTNSCNESSSSTTIRDVHISMRLMEDFLDLAKENTEKDLETCGILGAFLEKGTLYMTTLIIPKQESASNSCNATNEEEVFTIFNERSLYPVGWIHTHPSQSCFMSSVDLHTQYSYQAMIPEAFAIVLAPTDTSRSCGLFRITEPDGMNILKNCPERGFHPHKEPDNGNPVYEHCSNVYKNSNLRFEIFDLR* 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g2347 235 Gene3D Cytidine Deaminase, domain 2 39 235 - -
Psa2g2347 235 Pfam JAB1/Mov34/MPN/PAD-1 ubiquitin protease 58 165 IPR000555 GO:0005515|GO:0008233|GO:0008237
Psa2g2347 235 SUPERFAMILY JAB1/MPN domain 61 189 - -
Psa2g2347 235 PANTHER FI19924P1 7 235 - -
Psa2g2347 235 PANTHER AMSH-LIKE PROTEASE 7 235 - -
Psa2g2347 235 ProSiteProfiles MPN domain profile. 61 191 IPR037518 -
Psa2g2347 235 CDD MPN_AMSH_like 58 235 IPR044098 GO:0016579|GO:0061578|GO:0070536|GO:0140492
Psa2g2347 235 SMART pad1_6 60 188 IPR000555 GO:0005515|GO:0008233|GO:0008237
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g2347 Psa-Chr2 268473865 268477069 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g2347 K11866 - gmx:100807282 402.519
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa2g2347 2 268473865 268477069 Psa2g2347 2 268473865 268477069 ECH