Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g0858 ATGGCTAAACTTTTAGAAGACCGTGCTGAGTTTGTGAAAAAGAACGAGAAGAGTGAGATTCGCGACGCTGCGTTTGGTTTTCCCAATGAGTTTCCTTACGAGTTTGACTCGTTTGAAACTGAAAACAGTGACGAGGAGGATTTCTTTGCTGGGTTAACTCGTCGACTGAGTCAAGCCTCGGTGAATGAAACTCGGAAGGAGAAACTCGCTGTTCCCATTCTCAACAAGAAACCTGAGGAGAAGATTCGAGTCATGGCTGGTTCGCCTCAGTCGACGCTGGCCGGAATCGGAAGCTGGTCCGGTCGTAGCGGTGGTTCGAGCGAAGGAAGTCCGAATGGTTCGACTCGTGTTCCTTCGCCGACGACTATACCGTTTTCCGCTGAGAACGATGCTTGGGATGTGTTGTACGCCGCTGCGGGTGAGGTTGCTAGGTTGAAGATGAACGTTGAAGCTTCGTTGGTGGAGATTCAGAACAAAAGAGGAGTACTCGGTGGCGTTCCACCACCTGTTGCGGCGGAGAACCGTGCCGCCGCGTTTTTCTCAAACCCTAATCCTTCGGTTGTTCAATATCAACAAGTGAAGCAACAGTGTGATTCTGTTTGGGGTAGACAAGCCCAGGCCCAGGCCCACGCTCTTGCCCAAGCGAAAGCAACTAGCTGGTCGACTCAGGTTCAAAACAGAGGCTATGATTACGAGAGTGTGAAATGCACGCGCCCTATGCCTCGTTCGGTTTGGCATTCTCCTATTCAAGTTAAGCACCAAAATAACCCGGTTCTTTTTAACGGATCCGGGTCTCGATCCGGTTCTCAAATTGGATCCGGTGTTAAAAAAGGATGTGGAGGAACAGGGGTGTTCTTACCTCGTCAATATGGGGCCCCTCTTCCGGAATCTCGCAACAAAACAAATTGTGCTCCTGTTTTGGTCCCAACTAGGGTGATTCATGCTTTAAACATGAACATTGATGATTATAACGGTGGAAGACAACCTCGTTTCATGAATGATTTCAACGTGGATTATGATGCATTGTTGGCAAGGAGAAACGCTCTTCTGATGCAGCAGAGATTAAGGATGCAACGTGAAGAGGCAGCTAGCTATGAAGCTCGTCTTCCTCAGGAATGGACTTATTGA 1128 0.4885 MAKLLEDRAEFVKKNEKSEIRDAAFGFPNEFPYEFDSFETENSDEEDFFAGLTRRLSQASVNETRKEKLAVPILNKKPEEKIRVMAGSPQSTLAGIGSWSGRSGGSSEGSPNGSTRVPSPTTIPFSAENDAWDVLYAAAGEVARLKMNVEASLVEIQNKRGVLGGVPPPVAAENRAAAFFSNPNPSVVQYQQVKQQCDSVWGRQAQAQAHALAQAKATSWSTQVQNRGYDYESVKCTRPMPRSVWHSPIQVKHQNNPVLFNGSGSRSGSQIGSGVKKGCGGTGVFLPRQYGAPLPESRNKTNCAPVLVPTRVIHALNMNIDDYNGGRQPRFMNDFNVDYDALLARRNALLMQQRLRMQREEAASYEARLPQEWTY* 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g0858 375 MobiDBLite consensus disorder prediction 93 119 - -
Psa2g0858 375 PANTHER TIP41-LIKE PROTEIN 19 375 - -
Psa2g0858 375 PANTHER H/ACA RIBONUCLEOPROTEIN COMPLEX NON-CORE SUBUNIT NAF1-LIKE 19 375 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g0858 Psa-Chr2 53031561 53034056 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g0858 - - gmx:100816574 387.111
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g2929 5 226003187 226005662 Psa2g0858 2 53031561 53034056 ECH
Psa2g0858 2 53031561 53034056 Psa2g0858 2 53031561 53034056 ECH
Psa5g2929 5 226003187 226005662 Psa2g0858 2 53031561 53034056 PCT