Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g0181 ATGGCGCCTGTGGCAGCGAGAAGCGCCGGCGCTGTTGGTGCCGGAACCGCCATCTTACTCTCTCTCGCCGTCGCGTATTTCTTCTGTGATCGTCGCTGCAATTCATCGAAAAACAACAAGAAGAAGAAATCAAAGAATGGAATCCTTGCCGCCATTGGTAACACTCCTTTGATTCGAATCAACAGTCTCTCCGATGCCACCGGTTGCGAAATTCTTGGCAAGTGTGAGTTTTTGAACCCTGGAGGGAGTGTCAAGGATCGTGTAGCAGTTCAAATTATTGAAGAGGCTTTAGAATCTGGGCAGCTACGTAAAGGTGGTATAGTTACTGAAGGGAGTGTCGGAAGCACTGCCATTAGCTTTGCTACTGTTGCTCCTGCTTATGGATGCAAATGCCATGTGGTTATTCCAGATGATGCTGCCATTGAGAAGTCTCAAATAATTGAAGCTCTTGGGGCAAATGTTGAAAGAGTACGGCCAGTGTCAATCACTCACAAAGACCATTTTGTCAATATTGCAAGAAGACGGGCATCTGAAGCAAATGAGTTTGCATTTAAGCATAGAAAATCACAACCCAATGGCACGGACTCGCAGCAAATAAATGGTTATGAATCTGACGGACACGACCACAACTCGCCCTTTCCTAATGATTGTCAAGGCGGCTACTTTGCTGATCAGTTTGAGAACCTTGCAAACTTCAGGGCTCATTACCAAGGTACAGGACCTGAGATTTGGGAACAGACAAATGGGAAGTTAGATGCATTCGTTGCAGGAGCAGGCACTGGTGGTACTGTGGCTGGTGTTTCCAAGTTTCTTCAGGAAAAGAATTCAAACATCAAGTGTTACCTCATAGACCCTCCTGGTTCTGGCTTGTTTAATAAGGTAACGAGGGGGGTAATGTACACCAAAGAGGAGGCAGAAGGACGGAGACGTAAGAATCCGTTTGACACTATAACAGAAGGAATTGGAATTAACAGGCTAACAAGAAATTTTGCAGAGGCAAAACTTGATGGGGCCTTCAGAGCCACAGATATGGAAGCTGTTGAAATGGCCAGGTTTCTTGTGAAGAATGATGGGCTTTTCCTTGGGAGTTCTTCTGCATTGAACTGTATTGGAGCAGTTAGAGCAGCACAATCATTAGGCCCTGGTCACACAATTGTAACCATTCTGTGTGACAGTGGAATGAGACATTTGAGCAAGTTTTGTAATGATGAATACTTGTCTCAACTTGGTTTGACACCTAAAGCAACTGGATTAGAGTTCTTGGGTATCAAATGA 1275 0.4502 MAPVAARSAGAVGAGTAILLSLAVAYFFCDRRCNSSKNNKKKKSKNGILAAIGNTPLIRINSLSDATGCEILGKCEFLNPGGSVKDRVAVQIIEEALESGQLRKGGIVTEGSVGSTAISFATVAPAYGCKCHVVIPDDAAIEKSQIIEALGANVERVRPVSITHKDHFVNIARRRASEANEFAFKHRKSQPNGTDSQQINGYESDGHDHNSPFPNDCQGGYFADQFENLANFRAHYQGTGPEIWEQTNGKLDAFVAGAGTGGTVAGVSKFLQEKNSNIKCYLIDPPGSGLFNKVTRGVMYTKEEAEGRRRKNPFDTITEGIGINRLTRNFAEAKLDGAFRATDMEAVEMARFLVKNDGLFLGSSSALNCIGAVRAAQSLGPGHTIVTILCDSGMRHLSKFCNDEYLSQLGLTPKATGLEFLGIK* 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g0181 424 ProSitePatterns Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 74 92 IPR001216 GO:0006535
Psa2g0181 424 Pfam Pyridoxal-phosphate dependent enzyme 50 391 IPR001926 -
Psa2g0181 424 CDD CBS_like 53 398 - -
Psa2g0181 424 Gene3D - 82 232 IPR036052 -
Psa2g0181 424 PANTHER CYSTEINE SYNTHASE-RELATED 32 423 - -
Psa2g0181 424 Gene3D - 52 397 IPR036052 -
Psa2g0181 424 PANTHER CYSTATHIONINE BETA-SYNTHASE 32 423 - -
Psa2g0181 424 SUPERFAMILY Tryptophan synthase beta subunit-like PLP-dependent enzymes 46 410 IPR036052 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g0181 Psa-Chr2 6818359 6821994 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g0181 52 398 Miscellaneous Gene Families AT3G04940 28.940 1.22e-34 129
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g0181 K01738 - gmx:100799081 666.381
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa2g0181 2 6818359 6821994 Psa2g0181 2 6818359 6821994 ECH