Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa2g0151 ATGTTGCAGTGCATAGAGGGATTTAAGCATTTGTTTGCTCCTCTATTGCGATGTTGTGACCTTGACTTATATAAGCAGACAACTGGTCTTGAAGATCCTGAAATCCTTGCGAGGGAGACAGTTTTCAGTGTAAGTGAAATCGAAGCACTTTACGAGCTCTTTAAAAAGATAAGTAGTGCTGTGATTGACGATGGACTGATCAACAAGGAAGAGTTTCAATTGGCATTATTCAAGACAAGTAAAAAAGAAAGTTTGTTTGCTGATCGGGTATTTGATTTGTTTGATACAAAGCACAATGGGATACTTGGTTTCGAAGAGTTTGCTCGCGCTCTTTCCGTTTTCCATCCAAATGCCCCAATTGATAAAAAGATCGAGTTTTCCTTTCAATTGTATGATCTCAAGCAGCAGGGTTTTATTGAAAGACAAGAGGTGAAGCAAATGGTAGTTGCTACACTTGCTGAATCTGGCATGAACCTATCAGATGATGTTATAGAGAGTATAATCGACAAGACTTTTGAGGAAGCAGATACAAAGCATGACGGAAAGATTGATAAAGAAGAATGGAGAAACCTTGTTTTGCGCCATCCATCACTTCTCAAGAACATGACCCTTCAATATCTAAGGTAA 627 0.3876 MLQCIEGFKHLFAPLLRCCDLDLYKQTTGLEDPEILARETVFSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTSKKESLFADRVFDLFDTKHNGILGFEEFARALSVFHPNAPIDKKIEFSFQLYDLKQQGFIERQEVKQMVVATLAESGMNLSDDVIESIIDKTFEEADTKHDGKIDKEEWRNLVLRHPSLLKNMTLQYLR* 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa2g0151 208 SUPERFAMILY EF-hand 33 205 IPR011992 -
Psa2g0151 208 SMART efh_1 167 195 IPR002048 GO:0005509
Psa2g0151 208 SMART efh_1 86 114 IPR002048 GO:0005509
Psa2g0151 208 SMART efh_1 123 151 IPR002048 GO:0005509
Psa2g0151 208 Pfam EF-hand domain pair 64 109 IPR002048 GO:0005509
Psa2g0151 208 Pfam EF-hand domain pair 122 190 IPR002048 GO:0005509
Psa2g0151 208 ProSiteProfiles EF-hand calcium-binding domain profile. 82 117 IPR002048 GO:0005509
Psa2g0151 208 ProSiteProfiles EF-hand calcium-binding domain profile. 163 198 IPR002048 GO:0005509
Psa2g0151 208 PRINTS Recoverin family signature 90 111 - -
Psa2g0151 208 PRINTS Recoverin family signature 137 155 - -
Psa2g0151 208 PRINTS Recoverin family signature 183 203 - -
Psa2g0151 208 Gene3D - 32 208 - -
Psa2g0151 208 ProSiteProfiles EF-hand calcium-binding domain profile. 119 154 IPR002048 GO:0005509
Psa2g0151 208 PANTHER CALCINEURIN B 1 208 IPR045198 GO:0005509|GO:0019722|GO:0019900
Psa2g0151 208 PANTHER CALCINEURIN B-LIKE PROTEIN 3 ISOFORM X2 1 208 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa2g0151 Psa-Chr2 5664860 5668153 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa2g0151 1 208 EF-hand Containing Proteins AT5G55990 88.942 1.48e-135 377
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa2g0151 K06268 - pvy:116122368 395.586
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa2g0151 2 5664860 5668153 Psa2g0151 2 5664860 5668153 ECH